RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 KCNMB4Q86W47 210 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 RYBPQ8N488 228 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-209ENST00000556353 ANKRD49Q8WVL7 239 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 ATP6V1E2Q96A05 226 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 CFAP36Q96G28 342 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 DGAT2Q96PD7 388 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 GCNAQ96QF7 691 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 CCDC106Q9BWC9 280 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 LSG1Q9H089 658 aaKnown RBP3.92□□□□□ -1.78
PRPF39-209ENST00000556353 RNF41Q9H4P4 317 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-209ENST00000556353 LY9Q9HBG7 655 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 VAT1LQ9HCJ6 419 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 OLAHQ9NV23 265 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 SEPT10Q9P0V9 454 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 BAIAP2L1Q9UHR4 511 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 TSPAN16Q9UKR8 245 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 GPR34Q9UPC5 381 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 NOSIPQ9Y314 301 aaKnown RBP3.92□□□□□ -1.78
PRPF39-209ENST00000556353 MRPL11Q9Y3B7 192 aaKnown RBP3.92□□□□□ -1.78
PRPF39-209ENST00000556353 N6AMT1Q9Y5N5 214 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 F5P12259 2224 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 GON4LQ3T8J9 2241 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 FREM2Q5SZK8 3169 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 ANK1P16157 1881 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 CACNA1BQ00975 2339 aa3.92□□□□□ -1.78
PRPF39-209ENST00000556353 ZFYVE26Q68DK2 2539 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 MYH11P35749 1972 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SYNJ2BP-COX16A0A087WUM0 186 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 TRIM64A6NGJ6 449 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 TRIM64BA6NI03 449 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 H0YHG0 523 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 M0QX08 132 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SLC1A7O00341 560 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 PTGESO14684 152 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 CASQ2O14958 399 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SNX3O60493 162 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 GALR3O60755 368 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 ATP9AO75110 1047 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 BEST1O76090 585 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 LGALS2P05162 132 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 ABCB1P08183 1280 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SMIM10L2AP0DMW4 78 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SMIM10L2BP0DMW5 78 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 DESP17661 470 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 AOC1P19801 751 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 AADACP22760 399 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 HPDP32754 393 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 MGAT3Q09327 533 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 TRA2AQ13595 282 aaKnown RBP eCLIP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 OPCMLQ14982 345 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 STXBP2Q15833 593 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 IMMTQ16891 758 aaKnown RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 EIPR1Q53HC9 387 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 FAM182AQ5T1J6 154 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SLC24A5Q71RS6 500 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 CEACAM19Q7Z692 300 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 IQCA1Q86XH1 822 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 FAM184AQ8NB25 1140 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 DRAXINQ8NBI3 349 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SUMF1Q8NBK3 374 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 PHOSPHO2Q8TCD6 241 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 TEKT4Q8WW24 435 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 PIBF1Q8WXW3 757 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 DHTKD1Q96HY7 919 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 SPATA33Q96N06 139 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 ABHD1Q96SE0 405 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 CDCA3Q99618 268 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-209ENST00000556353 KRT23Q9C075 422 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 AIPL1Q9NZN9 384 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 BLOC1S6Q9UL45 172 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 STYXL1Q9Y6J8 313 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 AKAP13Q12802 2813 aa3.91□□□□□ -1.78
PRPF39-209ENST00000556353 A0A0B4J203 849 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 A0A1W2PPK0 400 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 GSTTP1A0A1W2PQM5 241 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 LRCH4O75427 683 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 RPS6KA5O75582 802 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 NXPH4O95158 308 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 ACSL3O95573 720 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 CHRNA1P02708 482 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 SUPT20HL2P0C7V6 817 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 DUX4L4P0CJ87 422 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 KRT13P13646 458 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 IL9P15248 144 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 EPCAMP16422 314 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 CD22P20273 847 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 CETN2P41208 172 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 RAD52P43351 418 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 NT5C2P49902 561 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 PRPF4BQ13523 1007 aaKnown RBP3.9□□□□□ -1.79
PRPF39-209ENST00000556353 PTPRCAPQ14761 206 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 UBE2SQ16763 222 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 RNF212Q495C1 297 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 MARCH8Q5T0T0 291 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 CFAP58Q5T655 872 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 SPATA1Q5VX52 437 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 AP1ARQ63HQ0 302 aa3.9□□□□□ -1.79
PRPF39-209ENST00000556353 IL17RELQ6ZVW7 336 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms