RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 DDX31Q9H8H2 851 aaKnown RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ZNF629Q9UEG4 869 aaPredicted RBP13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SLC6A5Q9Y345 797 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SPACA6W5XKT8 324 aa13.14□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FAM47E-STBD1D6RA91 191 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 KERAO60938 352 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ACSL3O95573 720 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TACR1P25103 407 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SERPINB3P29508 390 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SERPINB1P30740 379 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GALNSP34059 522 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ARFIP1P53367 373 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FUT7Q11130 342 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DDX39BQ13838 428 aaKnown RBP13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 KBTBD12Q3ZCT8 623 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NHSL2Q5HYW2 709 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NSUN5P2Q63ZY6 315 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 LACC1Q8IV20 430 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 WDR20Q8TBZ3 569 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SPPL2AQ8TCT8 520 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RIT1Q92963 219 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 JSRP1Q96MG2 331 aaPredicted RBP13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RILPQ96NA2 401 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GNRHR2Q96P88 292 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SMR3AQ99954 134 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SAYSD1Q9NPB0 183 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TEX10Q9NXF1 929 aaPredicted RBP13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 OPTCQ9UBM4 332 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DTX4Q9Y2E6 619 aa13.13□□□□□ -0.31
CHMP4BP1-201ENST00000556017 C15orf38-AP3S2A0A0A6YYH1 394 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CD8B2A6NJW9 211 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 OR6C76A6NM76 312 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 H0YIV9 168 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CCDC188H7C350 402 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GBAP04062 536 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FAM58BPP0C7Q3 252 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SLC35E2P0CK97 266 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FOSL1P15407 271 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 BMP7P18075 431 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DNASE1P24855 282 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GDF1P27539 372 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 HOXC12P31275 282 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PTGDSP41222 190 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CASP3P42574 277 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 AGFG1P52594 562 aaKnown RBP13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 IRF9Q00978 393 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 RPS6KA2Q15349 733 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 C3orf62Q6ZUJ4 267 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TEX9Q8N6V9 391 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SIMC1Q8NDZ2 872 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 C7orf57Q8NEG2 295 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 LINC01560Q8TB33 94 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DIO2Q92813 273 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TP53INP1Q96A56 240 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NXNL1Q96CM4 212 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ZNF597Q96LX8 424 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GPR78Q96P69 363 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 EPB41L4BQ9H329 900 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 C15orf41Q9Y2V0 281 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NPFFR2Q9Y5X5 522 aa13.12□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TLN2Q9Y4G6 2542 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SUPT3HB4E1H0 165 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 DVL2O14641 736 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 EIF3HO15372 352 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SUPT3HO75486 399 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NR2F6P10588 404 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 EPXP11678 715 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 EPB42P16452 691 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PTPN6P29350 595 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 PEX19P40855 299 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NEK2P51955 445 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 NAGLUP54802 743 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 MGAT2Q10469 447 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 CUL3Q13618 768 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 TRADDQ15628 312 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 GRTP1Q5TC63 336 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 LIPJQ5W064 366 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 FAM219BQ5XKK7 198 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 ADGRE4PQ86SQ3 457 aa13.11□□□□□ -0.31
CHMP4BP1-201ENST00000556017 LIX1Q8N485 282 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms