RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 DMXL1Q9Y485 3027 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 TCRBV16S1A1N1A0A5B0 115 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 VSTM2BA6NLU5 285 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 C17orf105B2RV13 164 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 PEX12O00623 359 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 EMC8O43402 210 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 CIB2O75838 187 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 SOX30O94993 753 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 AGR2O95994 175 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 EFNA1P20827 205 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 PTPN4P29074 926 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ZFP36L2P47974 494 aaKnown RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 CCT3P49368 545 aaKnown RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 HBA1P69905 142 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 RHAGQ02094 409 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF155Q12901 538 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 FADDQ13158 208 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ERV3-1Q14264 604 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 RTP5Q14D33 572 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 TLR1Q15399 786 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 CYP51A1Q16850 503 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 SPRED3Q2MJR0 410 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 SPATS1Q496A3 300 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 SAMD4BQ5PRF9 694 aaKnown RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ATAD3BQ5T9A4 648 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF517Q6ZMY9 492 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 SHISA6Q6ZSJ9 500 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF551Q7Z340 670 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 DEFB107AQ8IZN7 70 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 TMEM52Q8NDY8 209 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 PLPP5Q8NEB5 264 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 OR7G1Q8NGA0 311 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 GOT1L1Q8NHS2 421 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 JADE3Q92613 823 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 NACC2Q96BF6 587 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 MAGED4Q96JG8 741 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 CGREF1Q99674 301 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ECSITQ9BQ95 431 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 BTBD10Q9BSF8 475 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 THUMPD3Q9BV44 507 aaKnown RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 SPATA9Q9BWV2 254 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 LRMDAQ9H2I8 198 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 MMADHCQ9H3L0 296 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-220ENST00000555634 GLIPR2Q9H4G4 154 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ADA2Q9NZK5 511 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 ZFHX4Q86UP3 3567 aa10.49□□□□□ -0.73
SHMT2-220ENST00000555634 A0A087WV62 115 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 IGKV3D-11A0A0A0MRZ8 115 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 TEX51A0A1B0GUA7 166 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 PMS2P1A4D2B8 440 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 ASPDHA6ND91 283 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FBP2O00757 339 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 JRKO75564 520 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 DNAJC8O75937 253 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 GSNP06396 782 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 MC3RP41968 323 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 WNT3P56703 355 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 PSME3P61289 254 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 SNRPNP63162 240 aaKnown RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 PSPHP78330 225 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 BTG2P78543 158 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 GNA13Q14344 377 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 EXT1Q16394 746 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 LACTB2Q53H82 288 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 IRAK1BP1Q5VVH5 260 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 HLA-DQA1Q5Y7H0 255 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FAAH2Q6GMR7 532 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FAM180BQ6P0A1 224 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FAM199XQ6PEV8 388 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 RNF111Q6ZNA4 994 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 SLC29A4Q7RTT9 530 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 TMEM151BQ8IW70 566 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 MORN4Q8NDC4 146 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 RBM15BQ8NDT2 890 aaKnown RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 OR5AK3PQ8NH89 298 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 PSMA8Q8TAA3 256 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 ANKRD9Q96BM1 317 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FAM120BQ96EK7 910 aaKnown RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FBXL20Q96IG2 436 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF681Q96N22 645 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 ANKRD27Q96NW4 1050 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 SPSB2Q99619 263 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 ASCL3Q9NQ33 180 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 SLC22A11Q9NSA0 550 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 BCAP29Q9UHQ4 241 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 TCFL5Q9UL49 500 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 FARSAQ9Y285 508 aaKnown RBP10.48□□□□□ -0.73
SHMT2-220ENST00000555634 PCDHGB3Q9Y5G1 929 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 SEC16AO15027 2179 aa10.48□□□□□ -0.73
SHMT2-220ENST00000555634 NUP214P35658 2090 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 A0A1W2PNU3 283 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 SAGE2PA6NJ88 616 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 TTC36A6NLP5 189 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 DUXAA6NLW8 204 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CLIC1O00299 241 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PLOD2O00469 737 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 GSTA4O15217 222 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms