RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 IL4RP24394 825 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 PTPN4P29074 926 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 PPP2R1AP30153 589 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 MDH1P40925 334 aaKnown RBP3.66□□□□□ -1.82
KTN1-222ENST00000555506 ID1P41134 155 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 MATKP42679 507 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 ACAA2P42765 397 aaKnown RBP3.66□□□□□ -1.82
KTN1-222ENST00000555506 TMEM50BP56557 158 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 PEX3P56589 373 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 HSD17B7P56937 341 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 RPS27AP62979 156 aaKnown RBP3.66□□□□□ -1.82
KTN1-222ENST00000555506 ITPK1Q13572 414 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 TAF7Q15545 349 aaPredicted RBP3.66□□□□□ -1.82
KTN1-222ENST00000555506 HAGHQ16775 308 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 HKDC1Q2TB90 917 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 GFI1BQ5VTD9 330 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 AFTPHQ6ULP2 937 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 ZFAND4Q86XD8 727 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 METTL4Q8N3J2 472 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 BCORP1Q8N888 145 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 CHDHQ8NE62 594 aaPredicted RBP3.66□□□□□ -1.82
KTN1-222ENST00000555506 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 CHPT1Q8WUD6 406 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 SELENOMQ8WWX9 145 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 NR4A3Q92570 626 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 CCDC51Q96ER9 411 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 PARLQ9H300 379 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 DCTPP1Q9H773 170 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 VAT1LQ9HCJ6 419 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 YAE1D1Q9NRH1 226 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 TUBGCP4Q9UGJ1 667 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 MGAT4BQ9UQ53 548 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 KLHDC2Q9Y2U9 406 aa3.66□□□□□ -1.82
KTN1-222ENST00000555506 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 MEX3AA1L020 520 aaKnown RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 NEDD8-MDP1E9PL57 170 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 FBP2O00757 339 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 DUS4LO95620 317 aaKnown RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 ADORA3P0DMS8 318 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 NCF1P14598 390 aaPredicted RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 CD1DP15813 335 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 MAT2AP31153 395 aaKnown RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 KIF5BP33176 963 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 CRIP2P52943 208 aaPredicted RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 FASTKD3Q14CZ7 662 aaKnown RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 ECSCRQ19T08 205 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 SHROOM1Q2M3G4 852 aaPredicted RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 RHBDD2Q6NTF9 364 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 DPY19L2P2Q6ZN68 376 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 GOLGA7Q7Z5G4 137 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 KCNMB4Q86W47 210 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 CARM1Q86X55 608 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 ARL6IP6Q8N6S5 226 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 ZNF397Q8NF99 534 aaPredicted RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 FBXO25Q8TCJ0 367 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 PCNPQ8WW12 178 aaKnown RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 AGAP4Q96P64 663 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 TNFRSF13CQ96RJ3 184 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 LGMNQ99538 433 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 WRAP53Q9BUR4 548 aaKnown RBP3.65□□□□□ -1.83
KTN1-222ENST00000555506 RAB11FIP5Q9BXF6 653 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 COQ10BQ9H8M1 238 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 WDR41Q9HAD4 459 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 SCRT2Q9NQ03 307 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 SLC35D1Q9NTN3 355 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 ATXN10Q9UBB4 475 aa3.65□□□□□ -1.83
KTN1-222ENST00000555506 NIP7Q9Y221 180 aaKnown RBP eCLIP3.65□□□□□ -1.83
KTN1-222ENST00000555506 ABCC4O15439 1325 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 A0A087WZY1 265 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 TRBV5-4A0A0C4DH59 114 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 PDXKO00764 312 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 CPLX1O14810 134 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 LINC01565O15544 149 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 PEX11AO75192 247 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 TOM1L1O75674 476 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 HPRP00739 348 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 RRASP10301 218 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 CYP11B1P15538 503 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 PTPN6P29350 595 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 SLC1A6P48664 564 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 HSF2Q03933 536 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 CALCOCO2Q13137 446 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 FASTKQ14296 549 aaKnown RBP3.64□□□□□ -1.83
KTN1-222ENST00000555506 NECTIN1Q15223 517 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 LRIT3Q3SXY7 679 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 GDPGP1Q6ZNW5 385 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 MCM10Q7L590 875 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 MISPQ8IVT2 679 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 AQP11Q8NBQ7 271 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 OR1K1Q8NGR3 316 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.64□□□□□ -1.83
KTN1-222ENST00000555506 THUMPD2Q9BTF0 503 aaKnown RBP3.64□□□□□ -1.83
KTN1-222ENST00000555506 FICDQ9BVA6 458 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 TMCC3Q9ULS5 477 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 KIF3AQ9Y496 699 aa3.64□□□□□ -1.83
KTN1-222ENST00000555506 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.64□□□□□ -1.83
KTN1-222ENST00000555506 IGHV4-30-2A0A087WSY4 118 aa3.63□□□□□ -1.83
KTN1-222ENST00000555506 ANKRD30BLA7E2S9 258 aa3.63□□□□□ -1.83
KTN1-222ENST00000555506 CHADO15335 359 aa3.63□□□□□ -1.83
KTN1-222ENST00000555506 CFLARO15519 480 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms