RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FAM109AQ8N4B1 249 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 ZNF441Q8N8Z8 693 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 RDH11Q8TC12 318 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 AGAP11Q8TF27 550 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 CHTF18Q8WVB6 975 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 TMEM237Q96Q45 408 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 SECISBP2Q96T21 854 aaKnown RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 CNPPD1Q9BV87 410 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 FAIM2Q9BWQ8 316 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 TTTY12Q9BZ98 90 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 FARSBQ9NSD9 589 aaKnown RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 SIRT5Q9NXA8 310 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 QPCTLQ9NXS2 382 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 CFL2Q9Y281 166 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 A0A1B0GTH9 108 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 A0A1B0GVC2 190 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 C2orf92A0A1B0GVN3 265 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 WASHC1A8K0Z3 465 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 HRKO00198 91 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 ZNF354AO60765 605 aaPredicted RBP10.92□□□□□ -0.66
VRK1-204ENST00000555351 OR4F21O95013 312 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 CLDN14O95500 239 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 ESRRBO95718 433 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 GBAP04062 536 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 CLPSP04118 112 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 PYGBP11216 843 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 DRD2P14416 443 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 NAGAP17050 411 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 CSNK2A2P19784 350 aaPredicted RBP10.92□□□□□ -0.66
VRK1-204ENST00000555351 PTGER4P35408 488 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 CCT5P48643 541 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 TMED10P49755 219 aaKnown RBP10.92□□□□□ -0.66
VRK1-204ENST00000555351 XKP51811 444 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 MAP4K2Q12851 820 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 CCDC153Q494R4 210 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 SPIN4Q56A73 249 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 SGO1Q5FBB7 561 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 TMEM211Q6ICI0 200 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 GALNT18Q6P9A2 607 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 FAM47EQ6ZV65 393 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 SH2D5Q6ZV89 423 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 ZNF615Q8N8J6 731 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 CDYL2Q8N8U2 506 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 OR52N2Q8NGI0 321 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 METTL6Q8TCB7 284 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 TM4SF18Q96CE8 201 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 TP63Q9H3D4 680 aaPredicted RBP10.92□□□□□ -0.66
VRK1-204ENST00000555351 MCM8Q9UJA3 840 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 SH3BGRL2Q9UJC5 107 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 GRID1Q9ULK0 1009 aa10.92□□□□□ -0.66
VRK1-204ENST00000555351 TEX15Q9BXT5 2789 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 PINLYPA6NC86 204 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 TP53I11O14683 189 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 BCKDKO14874 412 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 HCN1O60741 890 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 CDH16O75309 829 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 HOXD4P09016 255 aaPredicted RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 CCL3P10147 92 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 S1PR1P21453 382 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 HTR1EP28566 365 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 HMOX2P30519 316 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 CRHR1P34998 444 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 DEKP35659 375 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 RFC3P40938 356 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 NRG3P56975 720 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 DNAJB13P59910 316 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 PSPHP78330 225 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 RPP38P78345 283 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 HSF1Q00613 529 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 PRICKLE4Q2TBC4 344 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 HLA-DQA1Q5Y7H0 255 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 TMEM81Q6P7N7 255 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 ZYG11AQ6WRX3 759 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 RPS27LQ71UM5 84 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 LRRC25Q8N386 305 aaPredicted RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 C1orf52Q8N6N3 182 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 CTHRC1Q96CG8 243 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 C11orf24Q96F05 449 aaPredicted RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 METTL2AQ96IZ6 378 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 OR10A5Q9H207 317 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 ZFP64Q9NPA5 681 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 COQ3Q9NZJ6 369 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 EHD3Q9NZN3 535 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 ZNF639Q9UID6 485 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 BOKQ9UMX3 212 aaPredicted RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 WBP11Q9Y2W2 641 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 PCDHGB3Q9Y5G1 929 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 CHCHD2Q9Y6H1 151 aaPredicted RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.91□□□□□ -0.66
VRK1-204ENST00000555351 MYO7BQ6PIF6 2116 aa10.91□□□□□ -0.66
VRK1-204ENST00000555351 GTF3C1Q12789 2109 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 CENPEQ02224 2701 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 A0A0G2JMM0 328 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 A0A1W2PPB8 328 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 A0A1W2PRS3 328 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 KIR3DP1A8MWS1 328 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 G3V2L1 256 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms