RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 RBMXL3Q8N7X1 1067 aaKnown RBP10.52□□□□□ -0.73
SHMT2-216ENST00000554975 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF420Q8TAQ5 688 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-216ENST00000554975 WDR20Q8TBZ3 569 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 ADAMTS16Q8TE57 1224 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 TMBIM1Q969X1 311 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 C5orf34Q96MH7 638 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 TSSK3Q96PN8 268 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 TUBA1CQ9BQE3 449 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 GABARAPL1Q9H0R8 117 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 ING2Q9H160 280 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 DCAF13Q9NV06 445 aaKnown RBP10.52□□□□□ -0.73
SHMT2-216ENST00000554975 SLAMF8Q9P0V8 285 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 FAM8A1Q9UBU6 413 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF282Q9UDV7 671 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-216ENST00000554975 BTNL2Q9UIR0 455 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 BAG5Q9UL15 447 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 DLGAP4Q9Y2H0 992 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 PCDHGA6Q9Y5G7 932 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 CNTRLQ7Z7A1 2325 aa10.52□□□□□ -0.73
SHMT2-216ENST00000554975 OR5K4A6NMS3 321 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 MAGEB17A8MXT2 336 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 G3V2T6 193 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 FOXE1O00358 373 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 E2F6O75461 281 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 CST1P01037 141 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 HOXB9P17482 250 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 IDSP22304 550 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 IMPA1P29218 277 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 PBLDP30039 288 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 TIA1P31483 386 aaKnown RBP eCLIP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 PIK3CBP42338 1070 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 MAGEA2P43356 314 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 GSTM5P46439 218 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SEPHS1P49903 392 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 CDK9P50750 372 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 NAE1Q13564 534 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 VEZF1Q14119 521 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 ELOAQ14241 798 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SELPLGQ14242 412 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 GK3PQ14409 553 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 ZC3H12BQ5HYM0 836 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 FAM219BQ5XKK7 198 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 TMEM220Q6QAJ8 160 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 IKBIPQ70UQ0 350 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SLC9B2Q86UD5 537 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 VRK3Q8IV63 474 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SLC30A8Q8IWU4 369 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 MSRB3Q8IXL7 192 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 C8orf59Q8N0T1 100 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 RAB42Q8N4Z0 105 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 KRTCAP2Q8N6L1 136 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 RASGEF1AQ8N9B8 481 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 FBXO30Q8TB52 745 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 MAGEE2Q8TD90 523 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SNRNP40Q96DI7 357 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 MTERF3Q96E29 417 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 OR6C1Q96RD1 312 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 PANX1Q96RD7 426 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 TIMM29Q9BSF4 260 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 REXO4Q9GZR2 422 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 PRM3Q9NNZ6 103 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SERHLQ9NQF3 203 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 CCDC177Q9NQR7 707 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 ASF1BQ9NVP2 202 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SLC25A37Q9NYZ2 338 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 SLC23A2Q9UGH3 650 aa10.51□□□□□ -0.73
SHMT2-216ENST00000554975 WBP11Q9Y2W2 641 aaKnown RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 MN1Q10571 1320 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-216ENST00000554975 DOCK10Q96BY6 2186 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 KIR2DS5A0A0G2JLQ3 304 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 A0A0G2JNG1 304 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 MGAT4DA6NG13 374 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 E7EQ34 232 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 KIR2DS3K7RE56 304 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PDLIM1O00151 329 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 DPM1O60762 260 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 SNRNP200O75643 2136 aaKnown RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 VIPP01282 170 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ALPLP05186 524 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ANKRD34CP0C6C1 535 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ITGAMP11215 1152 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PTX3P26022 381 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 RPL10P27635 214 aaKnown RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 BDKRB1P46663 353 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 HLCSP50747 726 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 CTSCP53634 463 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 TBPL1P62380 186 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ADARB1P78563 741 aaKnown RBP10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF763Q0D2J5 394 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 DOC2AQ14183 400 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 KIR2DS5Q14953 304 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ARHGAP19Q14CB8 494 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 CYP2A13Q16696 494 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 VMACQ2NL98 169 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 PGS1Q32NB8 556 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 ZBED5Q49AG3 693 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 CYBRD1Q53TN4 286 aa10.5□□□□□ -0.73
SHMT2-216ENST00000554975 GALNT18Q6P9A2 607 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms