RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, human

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2B1-208	ENST00000551009	FAM157C	P0CG43	387 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TROVE2	P10155	538 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ZNF44	P15621	663 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	GCFC2	P16383	781 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CKMT2	P17540	419 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CBL	P22681	906 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MPZ	P25189	248 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CHML	P26374	656 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CD1B	P29016	333 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	AXL	P30530	894 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NF2	P35240	595 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CDKN1B	P46527	198 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RPL21	P46778	160 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SLC1A6	P48664	564 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	STAR	P49675	285 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	THOP1	P52888	689 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RPS18	P62269	152 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RPP38	P78345	283 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	IL10RB	Q08334	325 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MAB21L1	Q13394	359 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CUL1	Q13616	776 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NPTX1	Q15818	432 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PTGIS	Q16647	500 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ADPRM	Q3LIE5	342 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NKAIN1	Q4KMZ8	207 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TTC19	Q6DKK2	380 aa	Predicted RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	BTNL8	Q6UX41	500 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ZNF497	Q6ZNH5	498 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TRMT11	Q7Z4G4	463 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MTERF4	Q7Z6M4	381 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PAQR7	Q86WK9	346 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CDR2L	Q86X02	465 aa	Predicted RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	UBQLNL	Q8IYU4	475 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MYOCD	Q8IZQ8	938 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SLC43A2	Q8N370	569 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	LRRC17	Q8N6Y2	441 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PROX1	Q92786	737 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SGK494	Q96LW2	274 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ZNF582	Q96NG8	517 aa	Predicted RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CHP1	Q99653	195 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RTP3	Q9BQQ7	232 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	C11orf70	Q9BRQ4	267 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	LMF2	Q9BU23	707 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	DPAGT1	Q9H3H5	408 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NEK6	Q9HC98	313 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SIX2	Q9NPC8	291 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	OLFML3	Q9NRN5	406 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SLC7A7	Q9UM01	511 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RUVBL2	Q9Y230	463 aa	Known RBP	4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	OR10H1	Q9Y4A9	318 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PARD3	Q8TEW0	1356 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PDS5B	Q9NTI5	1447 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	DCAF1	Q9Y4B6	1507 aa		4.1	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TRAV24	A0A0B4J272	114 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	LOC100506127	A0A0U1RQW1	187 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MED19	A0JLT2	244 aa	Predicted RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MEI4	A8MW99	385 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TMCO5B	A8MYB1	307 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009		K7ERQ8	282 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	EEF2K	O00418	725 aa	Known RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ZNF264	O43296	627 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	EXTL3	O43909	919 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	LCMT2	O60294	686 aa	Known RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ZNF254	O75437	659 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RPS6KA5	O75582	802 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	S100A6	P06703	90 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PROS1	P07225	676 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CAPN1	P07384	714 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	DBT	P11182	482 aa	Known RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CEACAM1	P13688	526 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CPN2	P22792	545 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	OR3A1	P47881	315 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	RGS4	P49798	205 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NAPA	P54920	295 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SLC3A1	Q07837	685 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	STX1A	Q16623	288 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	CLPP	Q16740	277 aa	Predicted RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009		Q3ZCU0	254 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ZNF311	Q5JNZ3	666 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	LCE3A	Q5TA76	89 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	FAAP20	Q6NZ36	180 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TMPRSS11F	Q6ZWK6	438 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TRPM8	Q7Z2W7	1104 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	LRRC75A-AS1	Q8N1F1	130 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	PPFIBP2	Q8ND30	876 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SPATA4	Q8NEY3	305 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	TSEN15	Q8WW01	171 aa	Known RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	EMG1	Q92979	244 aa	Known RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MSANTD3	Q96H12	275 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	C8orf76	Q96K31	380 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	C4orf36	Q96KX1	117 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	C7orf34	Q96L11	122 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	GUCD1	Q96NT3	240 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	NUP58	Q9BVL2	599 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	SLA2	Q9H6Q3	261 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	GSN-AS1	Q9NRJ2	163 aa		4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	MRPL17	Q9NRX2	175 aa	Known RBP	4.09	□□□□□ -1.75
ATP2B1-208	ENST00000551009	ACOXL	Q9NUZ1	547 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms