RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ATP1B1P05026 303 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 PRPS2P11908 318 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 S1PR1P21453 382 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 SSTR4P31391 388 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 SOX18P35713 384 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 RNF4P78317 190 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 FUT7Q11130 342 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 MAP4K2Q12851 820 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 LTB4RQ15722 352 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 SMU1Q2TAY7 513 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 PRICKLE4Q2TBC4 344 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 SLC6A19Q695T7 634 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 ANKRD26P1Q6NSI1 321 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 Q6ZS92 163 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 LARP4Q71RC2 724 aaKnown RBP eCLIP20.93■□□□□ 0.94
BRF1-216ENST00000550208 LGI4Q8N135 537 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 ARMC10Q8N2F6 343 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 LRRC25Q8N386 305 aaPredicted RBP20.93■□□□□ 0.94
BRF1-216ENST00000550208 BBS4Q96RK4 519 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 BRINP2Q9C0B6 783 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 REEP4Q9H6H4 257 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 GIMAP4Q9NUV9 329 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 LUZP4Q9P127 313 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 ENTPD4Q9Y227 616 aa20.93■□□□□ 0.94
BRF1-216ENST00000550208 CPAMD8Q8IZJ3 1885 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 COL6A6A6NMZ7 2263 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 GABRR3A8MPY1 467 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 MYO1GB0I1T2 1018 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 SLCO1B7G3V0H7 640 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 CD96P40200 585 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 ASMTP46597 345 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 SLC37A1P57057 533 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 CEBPEQ15744 281 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 HSP90B2PQ58FF3 399 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 ZNF468Q5VIY5 522 aaPredicted RBP20.92■□□□□ 0.94
BRF1-216ENST00000550208 C9orf40Q8IXQ3 194 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 SAMD14Q8IZD0 417 aaPredicted RBP20.92■□□□□ 0.94
BRF1-216ENST00000550208 OR8K3Q8NH51 312 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 SUN3Q8TAQ9 357 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 PIWIL2Q8TC59 973 aaKnown RBP20.92■□□□□ 0.94
BRF1-216ENST00000550208 NUDT8Q8WV74 236 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 MAGEB18Q96M61 343 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 C7orf26Q96N11 449 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 RNF32Q9H0A6 362 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 WDR55Q9H6Y2 383 aaPredicted RBP20.92■□□□□ 0.94
BRF1-216ENST00000550208 ANKRD10Q9NXR5 420 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 MAT2BQ9NZL9 334 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 ANAPC2Q9UJX6 822 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 B3GNT3Q9Y2A9 372 aa20.92■□□□□ 0.94
BRF1-216ENST00000550208 TRPC5OSA6NMA1 111 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 WWP2O00308 870 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 ZNF195O14628 629 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 SUV39H1O43463 412 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 VPS4BO75351 444 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 G6PDP11413 515 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 LBPP18428 481 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 MPIP34949 423 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 C19orf57Q0VDD7 668 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 MAD2L1Q13257 205 aaPredicted RBP20.91■□□□□ 0.94
BRF1-216ENST00000550208 TUBA3CQ13748 450 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 PTGR1Q14914 329 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 TRMT12Q53H54 448 aaKnown RBP20.91■□□□□ 0.94
BRF1-216ENST00000550208 ZNF385BQ569K4 471 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 C6orf163Q5TEZ5 329 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 TUBA3EQ6PEY2 450 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 RNF111Q6ZNA4 994 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 MAVSQ7Z434 540 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 ZNF615Q8N8J6 731 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 Q8NA96 180 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 SIMC1Q8NDZ2 872 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 OR5L2Q8NGL0 311 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 OR9A2Q8NGT5 310 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 PNPLA2Q96AD5 504 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 CTHRC1Q96CG8 243 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.91■□□□□ 0.94
BRF1-216ENST00000550208 SH3BP4Q9P0V3 963 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 ABI3Q9P2A4 366 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 MYOTQ9UBF9 498 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 ZNF639Q9UID6 485 aa20.91■□□□□ 0.94
BRF1-216ENST00000550208 HEMK1Q9Y5R4 338 aaPredicted RBP20.91■□□□□ 0.94
BRF1-216ENST00000550208 BOD1L1Q8NFC6 3051 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 GOLGA8QA0A0J9YX86 632 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 GOLGA8OA6NCC3 632 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 OR5H15A6NDH6 313 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 GOLGA8NF8WBI6 632 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 TBX19O60806 448 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 TNFSF10P50591 281 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 DIO3P55073 304 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 EXOSC7Q15024 291 aaKnown RBP20.9■□□□□ 0.94
BRF1-216ENST00000550208 MPEG1Q2M385 716 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 SLC9B1Q4ZJI4 515 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 ZNF628Q5EBL2 1059 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 KAT2AQ92830 837 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 PPCDCQ96CD2 204 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 UTP23Q9BRU9 249 aaKnown RBP20.9■□□□□ 0.94
BRF1-216ENST00000550208 OR10A5Q9H207 317 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 MED4Q9NPJ6 270 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.9■□□□□ 0.94
BRF1-216ENST00000550208 ASIC5Q9NY37 505 aa20.9■□□□□ 0.94
BRF1-216ENST00000550208 NOP53Q9NZM5 478 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms