RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 EMBQ6PCB8 327 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 ZCCHC23Q6ZST2 131 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 PAGE2Q7Z2X7 111 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 HORMAD2Q8N7B1 307 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 ZNF615Q8N8J6 731 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 OR52N2Q8NGI0 321 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 OR8K3Q8NH51 312 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 RDH11Q8TC12 318 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 C16orf78Q8WTQ4 265 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 APOPT1Q96IL0 206 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 FAM111AQ96PZ2 611 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 WWTR1Q9GZV5 400 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 PPCSQ9HAB8 311 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 WDR41Q9HAD4 459 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 HPF1Q9NWY4 346 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 COPS7AQ9UBW8 275 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 PLEKHB1Q9UF11 243 aaPredicted RBP9.04□□□□□ -0.96
HDAC7-229ENST00000549883 TINAGQ9UJW2 476 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 DLGAP4Q9Y2H0 992 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 FIS1Q9Y3D6 152 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 CCL27Q9Y4X3 112 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 HRH3Q9Y5N1 445 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 DOPEY1Q5JWR5 2465 aa9.04□□□□□ -0.96
HDAC7-229ENST00000549883 CACNA1DQ01668 2161 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 TRGV8A0A0C4DH27 118 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 C1orf226A1L170 272 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 ASNA1O43681 348 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 HS6ST1O60243 411 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PCDH7O60245 1069 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 SLC19A2O60779 497 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PDE9AO76083 593 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 CELA3AP09093 270 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 GP1BBP13224 206 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 HSD3B1P14060 373 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 ZNF24P17028 368 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 HSD3B2P26439 372 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 TIA1P31483 386 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PIGAP37287 484 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 MRPS35P82673 323 aaKnown RBP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 ZNF844Q08AG5 666 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 IFFO1Q0D2I5 559 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 FUT7Q11130 342 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 NNATQ16517 81 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PRICKLE4Q2TBC4 344 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 TRMT12Q53H54 448 aaKnown RBP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 CMPK2Q5EBM0 449 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 CFAP157Q5JU67 520 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 LIPMQ5VYY2 423 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 C3P1Q6ZMU1 363 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 GALNT12Q8IXK2 581 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PRR22Q8IZ63 422 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 MREGQ8N565 214 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 ZNF441Q8N8Z8 693 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 ZFP62Q8NB50 900 aaPredicted RBP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 OR2M7Q8NG81 312 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 OR5M3Q8NGP4 307 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 OR2T11Q8NH01 316 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 NUBPLQ8TB37 319 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 TCP10LQ8TDR4 215 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 KLHL29Q96CT2 875 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 CCDC126Q96EE4 140 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 ZNF681Q96N22 645 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 BRINP2Q9C0B6 783 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 DEFB127Q9H1M4 99 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 TUBB1Q9H4B7 451 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PROK2Q9HC23 129 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 MAT2BQ9NZL9 334 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 MCM8Q9UJA3 840 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 EXO1Q9UQ84 846 aaKnown RBP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 KLF13Q9Y2Y9 288 aaPredicted RBP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 POLR3HQ9Y535 204 aaPredicted RBP9.03□□□□□ -0.96
HDAC7-229ENST00000549883 MED12Q93074 2177 aa9.03□□□□□ -0.96
HDAC7-229ENST00000549883 PCNX3Q9H6A9 2034 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 GNG14A0A1W2PPG7 69 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 SERTM1A2A2V5 107 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 SYNDIG1LA6NDD5 238 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 FAM166BA8MTA8 275 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 TRIM13O60858 407 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 CBX7O95931 251 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 PORP16435 677 aaPredicted RBP9.02□□□□□ -0.97
HDAC7-229ENST00000549883 PCSK2P16519 638 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 TACR1P25103 407 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 GALNSP34059 522 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 DEKP35659 375 aaKnown RBP9.02□□□□□ -0.97
HDAC7-229ENST00000549883 CA7P43166 264 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 ACSM2AQ08AH3 577 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 FOXO1Q12778 655 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 CDSNQ15517 529 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 MPEG1Q2M385 716 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 SPDYAQ5MJ70 313 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 PRAMEF20Q5VT98 475 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 ACSM2BQ68CK6 577 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 BICRALQ6AI39 1079 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 RTL4Q6ZR62 310 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 SLC29A4Q7RTT9 530 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 SPPL2CQ8IUH8 684 aa9.02□□□□□ -0.97
HDAC7-229ENST00000549883 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms