RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PCDHGA1Q9Y5H4 931 aa3.56□□□□□ -1.84
APAF1-208ENST00000549007 PTPRZ1P23471 2315 aaPredicted RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 ANKRD36A6QL64 1941 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 TRBV5-3A0A0A0MS03 114 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 C1orf232A0A0U1RR37 186 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CTAGE15A4D2H0 777 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 J3QR06 171 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 ZIC3O60481 467 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 GAS8O95995 478 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CTAGE8P0CG41 777 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PRSS56P0CW18 603 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 HRH2P25021 359 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 HSPA9P38646 679 aaKnown RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 RPL21P46778 160 aaKnown RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 FNTAP49354 379 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PROK1P58294 105 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CFHR1Q03591 330 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 WHAMMP3Q1A5X7 153 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 LRRC66Q68CR7 880 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 TCEAL6Q6IPX3 200 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 FAM57BQ71RH2 274 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 HSD11B1LQ7Z5J1 315 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CTAGE6Q86UF2 777 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CTAGE4Q8IX94 777 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 BEST3Q8N1M1 668 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 DNAAF3Q8N9W5 541 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 TCEAL3Q969E4 200 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SPSB1Q96BD6 273 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 RTP4Q96DX8 246 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SPDL1Q96EA4 605 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 COQ10AQ96MF6 247 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 TRIB3Q96RU7 358 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CSF3RQ99062 836 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 MMP27Q9H306 513 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PAK5Q9P286 719 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 TLK1Q9UKI8 766 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 NCKAP1Q9Y2A7 1128 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 FADS3Q9Y5Q0 445 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 ARL5AQ9Y689 179 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 EML5Q05BV3 1969 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 DNAH14Q0VDD8 3507 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 FEZF1A0PJY2 475 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 OR51F1A6NGY5 319 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 MEI4A8MW99 385 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 ALOX15BO15296 676 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PAK4O96013 591 aaPredicted RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 VPREB1P12018 145 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 MAKP20794 623 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 MPZP25189 248 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 STIP1P31948 543 aaKnown RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 MMP12P39900 470 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 GEMP55040 296 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 ZNF33AQ06730 810 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 CKAP4Q07065 602 aaKnown RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 SCN1BQ07699 218 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PRPSAP1Q14558 356 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PARP6Q2NL67 630 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 C8orf74Q6P047 294 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 TMEM182Q6ZP80 229 aaPredicted RBP3.55□□□□□ -1.84
APAF1-208ENST00000549007 LONP2Q86WA8 852 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 DDB2Q92466 427 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 BIRC7Q96CA5 298 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 ECHDC3Q96DC8 303 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 PPP1R16AQ96I34 528 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 ZNF778Q96MU6 729 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 RUNDC3BQ96NL0 473 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 VAT1Q99536 393 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 GFI1Q99684 422 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SLC25A23Q9BV35 468 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SEMA6AQ9H2E6 1030 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 MMP25Q9NPA2 562 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SLC2A6Q9UGQ3 507 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 SPAG17Q6Q759 2223 aa3.55□□□□□ -1.84
APAF1-208ENST00000549007 LOC100509620A0A075B734 347 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 A0A0J9YYE9 177 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 ANKRD66B4E2M5 251 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 GOLGA8KD6RF30 607 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 GOLGA8TH3BQL2 631 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 SOCS5O75159 536 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 PIAS1O75925 651 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 ANXA9O76027 345 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 AP2A1O95782 977 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 TRBC1P01850 177 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 PCCBP05166 539 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 IGHV4-34P06331 123 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 GM2AP17900 193 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 IVDP26440 423 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 CA5AP35218 305 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 ADRA1AP35348 466 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 MAGEA9P43362 315 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 CSNK1DP48730 415 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 GUCY2DQ02846 1103 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 KCNJ11Q14654 390 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 MEP1BQ16820 701 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 ZNF542PQ5EBM4 170 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 PIK3CD-AS1Q5SR53 167 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 TPRG1LQ5T0D9 272 aa3.54□□□□□ -1.84
APAF1-208ENST00000549007 XP32Q5T750 250 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms