RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 H0YIV9 168 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 UBXN8O00124 270 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 OR10H2O60403 315 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SUPT3HO75486 399 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SNX4O95219 450 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 LTA4HP09960 611 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SLC35E2P0CK97 266 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 DNASE1P24855 282 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 TMED10P49755 219 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 HNRNPH2P55795 449 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 PPP2R2AP63151 447 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 PHEXP78562 749 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 CRYZQ08257 329 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 CUL3Q13618 768 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 DAZAP2Q15038 168 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 RPS6KA2Q15349 733 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 ACSF3Q4G176 576 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 TMEM198Q66K66 360 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 C18orf63Q68DL7 685 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 CAMKMTQ7Z624 323 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 PM20D2Q8IYS1 436 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 CEP112Q8N8E3 955 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 ZNF441Q8N8Z8 693 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 RELL2Q8NC24 303 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 REPS1Q96D71 796 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 GAL3ST4Q96RP7 486 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 MTERF1Q99551 399 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SH3GL2Q99962 352 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 ERP44Q9BS26 406 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 SORBS1Q9BX66 1292 aaKnown RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 ZNF717Q9BY31 904 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-218ENST00000548945 WDR41Q9HAD4 459 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 ASB4Q9Y574 426 aa11.8□□□□□ -0.52
PTCH1-218ENST00000548945 A0A0A6YYD5 115 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 C2orf92A0A1B0GVN3 265 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 FAM187AA6NFU0 413 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 GOSR1O95249 250 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 SLU7O95391 586 aaKnown RBP11.79□□□□□ -0.52
PTCH1-218ENST00000548945 IL2RAP01589 272 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 CLPSP04118 112 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 NR2F6P10588 404 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 MTHFD2P13995 350 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 FOSL1P15407 271 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 KLK2P20151 261 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 BMP5P22003 454 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 GDF1P27539 372 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 UQCRC1P31930 480 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 BSGP35613 385 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 DLG1Q12959 904 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 DUSP8Q13202 625 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 NAB1Q13506 487 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 DDX39BQ13838 428 aaKnown RBP11.79□□□□□ -0.52
PTCH1-218ENST00000548945 NHSL2Q5HYW2 709 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 METTL2BQ6P1Q9 378 aaKnown RBP11.79□□□□□ -0.52
PTCH1-218ENST00000548945 RAPH1Q70E73 1250 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 CTAGE3PQ8IX95 158 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 TEX9Q8N6V9 391 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 MNS1Q8NEH6 495 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 C17orf47Q8NEP4 570 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 GOT1L1Q8NHS2 421 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-218ENST00000548945 DIO2Q92813 273 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 HSPBAP1Q96EW2 488 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 JSRP1Q96MG2 331 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-218ENST00000548945 TIMP4Q99727 224 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 UBQLN3Q9H347 655 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 SNX15Q9NRS6 342 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 ANGPTL3Q9Y5C1 460 aa11.79□□□□□ -0.52
PTCH1-218ENST00000548945 MED12LQ86YW9 2145 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 KIAA1549Q9HCM3 1950 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 C15orf38-AP3S2A0A0A6YYH1 394 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 A0A1W2PR48 441 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 CD8B2A6NJW9 211 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 FOXE1O00358 373 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-218ENST00000548945 TMPRSS11DO60235 418 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 CDH16O75309 829 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 EEDO75530 441 aaKnown RBP11.78□□□□□ -0.52
PTCH1-218ENST00000548945 FAM155BO75949 473 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 HPNP05981 417 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 FAM58BPP0C7Q3 252 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 PIK3CGP48736 1102 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 TRPC1P48995 793 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
PTCH1-218ENST00000548945 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
PTCH1-218ENST00000548945 NRG3P56975 720 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 GPX6P59796 221 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 RPS13P62277 151 aaKnown RBP11.78□□□□□ -0.52
PTCH1-218ENST00000548945 RPP38P78345 283 aaKnown RBP11.78□□□□□ -0.52
PTCH1-218ENST00000548945 FUT7Q11130 342 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 SLMAPQ14BN4 828 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 SETDB1Q15047 1291 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 CEBPEQ15744 281 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 KBTBD12Q3ZCT8 623 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 NSUN5P2Q63ZY6 315 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 VASNQ6EMK4 673 aa11.78□□□□□ -0.52
PTCH1-218ENST00000548945 OR52E8Q6IFG1 317 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms