RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 NOXRED1Q6NXP6 359 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 RNF111Q6ZNA4 994 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 GALNTL5Q7Z4T8 443 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 DDIASQ8IXT1 998 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 TMEM178AQ8NBL3 297 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 NUBPLQ8TB37 319 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 ASB15Q8WXK1 588 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 METTL2AQ96IZ6 378 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF681Q96N22 645 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 ZDHHC2Q9UIJ5 367 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF780BQ9Y6R6 833 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 PIP5K1BO14986 540 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 ITM2AO43736 263 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF354AO60765 605 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 OR6B1O95007 311 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 CBX6O95503 412 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 ATP1B1P05026 303 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 SERPINE1P05121 402 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 NEFHP12036 1026 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 PTGER1P34995 402 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 SOX3P41225 446 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 PMP22Q01453 160 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 C2orf80Q0P641 193 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 MGAT2Q10469 447 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 MAPKAPK3Q16644 382 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 MPEG1Q2M385 716 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 PRICKLE4Q2TBC4 344 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF324BQ6AW86 544 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 SLC29A4Q7RTT9 530 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 CYP4Z2PQ8N1L4 340 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 LRRC25Q8N386 305 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 ANKRD42Q8N9B4 389 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 CDC26Q8NHZ8 85 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 TMEM125Q96AQ2 219 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 EXOSC8Q96B26 276 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF395Q9H8N7 513 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 MYNNQ9NPC7 610 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 OLAHQ9NV23 265 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 EHD3Q9NZN3 535 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 CROCCQ5TZA2 2017 aa17.35■□□□□ 0.37
PRPF40B-206ENST00000547764 TMEM120BA0PK00 339 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 OR6C76A6NM76 312 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 A8MVJ9 347 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 TMEM114B3SHH9 223 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 LSM1O15116 133 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 NME2P1O60361 137 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 LYPLA1O75608 230 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 SVILO95425 2214 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 HSPA4LO95757 839 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 DDCP20711 480 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 S1PR1P21453 382 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 NME2P22392 152 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 MAGOHP61326 146 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 SRSF11Q05519 484 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 MAP4K2Q12851 820 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 ESPL1Q14674 2120 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 RFTN2Q52LD8 501 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 PIGGQ5H8A4 983 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 C6orf163Q5TEZ5 329 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 FAM71E1Q6IPT2 247 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 FAM111BQ6SJ93 734 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 IL20RBQ6UXL0 311 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 MDGA2Q7Z553 956 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 GPALPP1Q8IXQ4 340 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF615Q8N8J6 731 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 ADCY4Q8NFM4 1077 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 DNAJB8Q8NHS0 232 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 TLCD1Q96CP7 247 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 GAL3ST4Q96RP7 486 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 PAIP2Q9BPZ3 127 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 SLX1AQ9BQ83 275 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 BRINP2Q9C0B6 783 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 WWTR1Q9GZV5 400 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 OR10A5Q9H207 317 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 PFDN4Q9NQP4 134 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 HPF1Q9NWY4 346 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 MAT2BQ9NZL9 334 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 ERVK-11Q9UQG0 969 aa17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 WBP11Q9Y2W2 641 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-206ENST00000547764 ANKUB1A6NFN9 424 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 CRYABP02511 175 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 BGNP21810 368 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 TACR1P25103 407 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 SOX18P35713 384 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 WDR4P57081 412 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 ABCE1P61221 599 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 EBPQ15125 230 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 LTB4RQ15722 352 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 PRSS53Q2L4Q9 553 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 HHATQ5VTY9 493 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 CCDC116Q8IYX3 515 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 SAMD14Q8IZD0 417 aaPredicted RBP17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 VWA5B2Q8N398 1253 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 ST6GALNAC3Q8NDV1 305 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 OR7G1Q8NGA0 311 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 NR4A3Q92570 626 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 EGLN2Q96KS0 407 aa17.33■□□□□ 0.36
PRPF40B-206ENST00000547764 FCRL1Q96LA6 429 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms