RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 KLC3Q6P597 504 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 GOLGA7Q7Z5G4 137 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 L3MBTL4Q8NA19 623 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 WDR20Q8TBZ3 569 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 NRGNQ92686 78 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 DIO2Q92813 273 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 NINJ1Q92982 152 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 IPPKQ9H8X2 491 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 SNX15Q9NRS6 342 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 DNAJB12Q9NXW2 375 aaKnown RBP12.97□□□□□ -0.33
DDX11-228ENST00000545115 PYCARDQ9ULZ3 195 aa12.97□□□□□ -0.33
DDX11-228ENST00000545115 TNPO3Q9Y5L0 923 aaKnown RBP12.97□□□□□ -0.33
DDX11-228ENST00000545115 C15orf38-AP3S2A0A0A6YYH1 394 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 LRRC14BA6NHZ5 514 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 DVL2O14641 736 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 TRIM3O75382 744 aaPredicted RBP12.96□□□□□ -0.33
DDX11-228ENST00000545115 CTAG2O75638 210 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 SEMA3DO95025 777 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 KLHL2O95198 593 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 SSTR4P31391 388 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 NEK2P51955 445 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 IST1P53990 364 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 DUSP8Q13202 625 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 HLA-DQA1Q5Y7H0 255 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 METTL2BQ6P1Q9 378 aaKnown RBP12.96□□□□□ -0.33
DDX11-228ENST00000545115 ZDHHC24Q6UX98 284 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 SEM1Q6ZVN7 128 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 GALNT12Q8IXK2 581 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 ZZZ3Q8IYH5 903 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 TP53INP1Q96A56 240 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 SECISBP2Q96T21 854 aaKnown RBP12.96□□□□□ -0.33
DDX11-228ENST00000545115 POLDIP3Q9BY77 421 aaKnown RBP12.96□□□□□ -0.33
DDX11-228ENST00000545115 CXorf21Q9HAI6 301 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 RNF11Q9Y3C5 154 aa12.96□□□□□ -0.33
DDX11-228ENST00000545115 A0A096LPK6 155 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 HMX2A2RU54 273 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 AHRRA9YTQ3 701 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 SNX4O95219 450 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 SIX3O95343 332 aaPredicted RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 CLDN9O95484 217 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 GBAP04062 536 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 BMP5P22003 454 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 PIK3R1P27986 724 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 UQCRC1P31930 480 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 ARL1P40616 181 aaPredicted RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 KIR2DL3P43628 341 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 ASCL1P50553 236 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 NRG3P56975 720 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 FBXW4P57775 412 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 CRYZQ08257 329 aaKnown RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 FUT7Q11130 342 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 TRADDQ15628 312 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 ACSF3Q4G176 576 aaPredicted RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 C6orf163Q5TEZ5 329 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 LACC1Q8IV20 430 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 RELL2Q8NC24 303 aaPredicted RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 SPPL2AQ8TCT8 520 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 UCN3Q969E3 161 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 ATP6V1E2Q96A05 226 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 MRRFQ96E11 262 aaKnown RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 RILPQ96NA2 401 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 SERPINI1Q99574 410 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 TEX10Q9NXF1 929 aaPredicted RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
DDX11-228ENST00000545115 NPFFR2Q9Y5X5 522 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 IKBKGQ9Y6K9 419 aa12.95□□□□□ -0.34
DDX11-228ENST00000545115 NCKAP5O14513 1909 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 A0A1W2PS29 197 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 SYT5O00445 386 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 PGRMC2O15173 223 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 EPPINO95925 133 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 ALDOAP04075 364 aaKnown RBP12.94□□□□□ -0.34
DDX11-228ENST00000545115 CT62P0C5K7 136 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 TYK2P29597 1187 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 TIMP3P35625 211 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 MASP1P48740 699 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 SERPINB8P50452 374 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 CCNG1P51959 295 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
DDX11-228ENST00000545115 SNTB1Q13884 538 aaKnown RBP12.94□□□□□ -0.34
DDX11-228ENST00000545115 SF3B4Q15427 424 aaKnown RBP eCLIP12.94□□□□□ -0.342e-12■■■□□ 18.3
DDX11-228ENST00000545115 UAP1Q16222 522 aaPredicted RBP12.94□□□□□ -0.34
DDX11-228ENST00000545115 C10orf62Q5T681 223 aaPredicted RBP12.94□□□□□ -0.34
DDX11-228ENST00000545115 BICRALQ6AI39 1079 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 PACS2Q86VP3 889 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 NAXEQ8NCW5 288 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 C17orf47Q8NEP4 570 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 TNIP2Q8NFZ5 429 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 OR4K14Q8NGD5 310 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 GPR78Q96P69 363 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 TIMP4Q99727 224 aa12.94□□□□□ -0.34
DDX11-228ENST00000545115 FOXC2Q99958 501 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms