RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 GJD3Q8N144 294 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 DHRSXQ8N5I4 330 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 OR4D11Q8NGI4 311 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 COL21A1Q96P44 957 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 ANKRD60Q9BZ19 345 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 MAGIXQ9H6Y5 334 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 ZNF780BQ9Y6R6 833 aa12.87□□□□□ -0.35
HCFC2-202ENST00000544223 CHRM4P08173 479 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 PCSK2P16519 638 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 CDH12P55289 794 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 PCBP3P57721 371 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 TXNL4AP83876 142 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 EXOSC7Q15024 291 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 ZC3H14Q6PJT7 736 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 ABHD13Q7L211 337 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 EID3Q8N140 333 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 GPR32P1Q8NGA4 272 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 UBE2FQ969M7 185 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 GRIP2Q9C0E4 1043 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 YY1AP1Q9H869 796 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 ACSS1Q9NUB1 689 aaPredicted RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 THUMPD1Q9NXG2 353 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 ENTPD2Q9Y5L3 495 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 LAMA5O15230 3695 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 HRKO00198 91 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 NR2F1P10589 423 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 THRBP10828 461 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 FASLGP48023 281 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 HSPA13P48723 471 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 HOXC5Q00444 222 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 SHBQ15464 509 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 PUS10Q3MIT2 529 aaKnown RBP12.86□□□□□ -0.35
HCFC2-202ENST00000544223 CCNJQ5T5M9 372 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 METTL25Q8N6Q8 603 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 SLC16A11Q8NCK7 471 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 NUP43Q8NFH3 380 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 SLC9A6Q92581 669 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 BAG5Q9UL15 447 aa12.86□□□□□ -0.35
HCFC2-202ENST00000544223 CLDN24A6NM45 220 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 M0R3H8 397 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 FCMRO60667 390 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 TBX19O60806 448 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ALBP02768 609 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 CT62P0C5K7 136 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 GIMD1P0DJR0 217 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 IL7RP16871 459 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 MPIP34949 423 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 CAPGP40121 348 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 BUD31P41223 144 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 TEAD4Q15561 434 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 TMEM151BQ8IW70 566 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 SDCCAG3Q96C92 435 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 PEX11GQ96HA9 241 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 SERINC2Q96SA4 455 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 RIBC2Q9H4K1 309 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 EHD3Q9NZN3 535 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 SLC22A7Q9Y694 548 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 PCDH17O14917 1159 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 VILLO15195 856 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 GALR3O60755 368 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 BTG2P78543 158 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 SPIBQ01892 262 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 PIGFQ07326 219 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 MYBPC3Q14896 1274 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ZNF630Q2M218 657 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 GPAT3Q53EU6 434 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 UBALD2Q8IYN6 164 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 OR9Q2Q8NGE9 314 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 OR5K1Q8NHB7 308 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ZFPM2Q8WW38 1151 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 DNASE2BQ8WZ79 361 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 PIGKQ92643 395 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ADAP2Q9NPF8 381 aa12.85□□□□□ -0.35
HCFC2-202ENST00000544223 ATXN7L1Q9ULK2 861 aaPredicted RBP12.85□□□□□ -0.35
HCFC2-202ENST00000544223 CYR61O00622 381 aa12.84□□□□□ -0.35
HCFC2-202ENST00000544223 FFAR1O14842 300 aa12.84□□□□□ -0.35
HCFC2-202ENST00000544223 H6PDO95479 791 aa12.84□□□□□ -0.35
HCFC2-202ENST00000544223 NUDT1P36639 197 aa12.84□□□□□ -0.35
HCFC2-202ENST00000544223 RFX3P48380 749 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms