RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 IFNA10P01566 189 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 ART1P52961 327 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 CRISP1P54107 249 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 CCL14Q16627 93 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 TPGS2Q68CL5 300 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 AWAT2Q6E213 333 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 PRR18Q8N4B5 295 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 C3orf58Q8NDZ4 430 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 NDNFQ8TB73 568 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 FAM83CQ9BQN1 747 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 RNF215Q9Y6U7 377 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 UBFD1O14562 309 aaKnown RBP14.78□□□□□ -0.04
CHD4-210ENST00000544040 CASC3O15234 703 aaKnown RBP14.78□□□□□ -0.04
CHD4-210ENST00000544040 UCHL1P09936 223 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 RAB11BQ15907 218 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 SPATS1Q496A3 300 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 MALSU1Q96EH3 234 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 PRDM9Q9NQV7 894 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 TDP1Q9NUW8 608 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 WDPCPO95876 746 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 KNG1P01042 644 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 ETV3P41162 512 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 AKR1C2P52895 323 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 FXYD4P59646 89 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 TSPAN33Q86UF1 283 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 OSTM1Q86WC4 334 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 KCTD13Q8WZ19 329 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 RPS10P5Q9NQ39 176 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 C19orf25Q9UFG5 118 aaPredicted RBP14.78□□□□□ -0.04
CHD4-210ENST00000544040 DIRAS3O95661 229 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 GGT2P36268 569 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 CLCN2P51788 898 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 RIDAP52758 137 aaKnown RBP14.78□□□□□ -0.04
CHD4-210ENST00000544040 SELENOVP59797 346 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 ACTC1P68032 377 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 ACTA1P68133 377 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 MLC1Q15049 377 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 OR52P1PQ8NH57 321 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 PLEKHO2Q8TD55 490 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 TSPEARQ8WU66 669 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 SMOC2Q9H3U7 446 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 CCM2LQ9NUG4 571 aaPredicted RBP14.78□□□□□ -0.04
CHD4-210ENST00000544040 HRASLS2Q9NWW9 162 aa14.78□□□□□ -0.04
CHD4-210ENST00000544040 INHAP05111 366 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 PRKCZQ05513 592 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 NPRL3Q12980 569 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 FAM180BQ6P0A1 224 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 FIGNL1Q6PIW4 674 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 IQCF1Q8N6M8 205 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 DCUN1D4Q92564 292 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 FKBP10Q96AY3 582 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 SGCZQ96LD1 299 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 CNN2Q99439 309 aaKnown RBP14.77□□□□□ -0.04
CHD4-210ENST00000544040 BIN3Q9NQY0 253 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 GNG13Q9P2W3 67 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 B4GALT6Q9UBX8 382 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 SCML2Q9UQR0 700 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 DNMT3AQ9Y6K1 912 aaPredicted RBP14.77□□□□□ -0.04
CHD4-210ENST00000544040 IDH3GP51553 393 aaPredicted RBP14.77□□□□□ -0.04
CHD4-210ENST00000544040 ZXDBP98169 803 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 GALNT2Q10471 571 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 ZNF776Q68DI1 518 aaPredicted RBP14.77□□□□□ -0.04
CHD4-210ENST00000544040 SLC7A5P1Q8MH63 180 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 PQLC3Q8N755 202 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 OR5P2Q8WZ92 322 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 PTCHD1Q96NR3 888 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 CNTNAP3BQ96NU0 1288 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 PITX2Q99697 317 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 DNTTIP1Q9H147 329 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 COQ4Q9Y3A0 265 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 A0A0G2JMP0 313 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 PRKACAP17612 351 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 TNFRSF1BP20333 461 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 AGTR1P30556 359 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 GMPRP36959 345 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 SCGB2A2Q13296 93 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 GPM6BQ13491 265 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 BAIAP2L2Q6UXY1 529 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 IGFN1Q86VF2 1251 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 OR4M2Q8NGB6 313 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 MR1Q95460 341 aa14.77□□□□□ -0.04
CHD4-210ENST00000544040 MRM3Q9HC36 420 aaKnown RBP14.77□□□□□ -0.04
CHD4-210ENST00000544040 SDHDO14521 159 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 ARPC5O15511 151 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 ASGR2P07307 311 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 OR4D2P58180 307 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 FGFBP1Q14512 234 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 ZNF791Q3KP31 576 aaPredicted RBP14.77□□□□□ -0.05
CHD4-210ENST00000544040 AKR1C8PQ5T2L2 129 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 MAPK15Q8TD08 544 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 G6PC3Q9BUM1 346 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 CACNG6Q9BXT2 260 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 FANCFQ9NPI8 374 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 RAD1O60671 282 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 MITFO75030 526 aaPredicted RBP14.77□□□□□ -0.05
CHD4-210ENST00000544040 HOXB2P14652 356 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 CD1DP15813 335 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 RSU1Q15404 277 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 PLBD1Q6P4A8 553 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms