RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 OR5K4A6NMS3 321 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 PCDH17O14917 1159 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 SEC14L2O76054 403 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 JUNDP17535 347 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 CD6P30203 668 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 LIMS1P48059 325 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 KCNJ5P48544 419 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 HMGA2P52926 109 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 LASP1Q14847 261 aaKnown RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 TBC1D25Q3MII6 688 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 COLEC12Q5KU26 742 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 FRMD1Q8N878 549 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 CAMKVQ8NCB2 501 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 OR9Q2Q8NGE9 314 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 BBS10Q8TAM1 723 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 RERGQ96A58 199 aaPredicted RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 ALPK1Q96QP1 1244 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 SERINC2Q96SA4 455 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 YIPF4Q9BSR8 244 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 LHPPQ9H008 270 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 C3orf14Q9HBI5 128 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 RASSF1Q9NS23 344 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 AASSQ9UDR5 926 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 NAALAD2Q9Y3Q0 740 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 P2RX6O15547 441 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 EMC8O43402 210 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 FAM20BO75063 409 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 HMGN2P05204 90 aaKnown RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 ZNF10P21506 573 aaPredicted RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 CPN2P22792 545 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 NUDT1P36639 197 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 UBE2IP63279 158 aaKnown RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 TNFRSF17Q02223 184 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 TDGQ13569 410 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 FZD2Q14332 565 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 PROX2Q3B8N5 592 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 ABHD13Q7L211 337 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 TSTD1Q8NFU3 115 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 OR9A2Q8NGT5 310 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 VANGL1Q8TAA9 524 aaPredicted RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 SLC37A2Q8TED4 501 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 OTUB1Q96FW1 271 aaPredicted RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 NIPSNAP1Q9BPW8 284 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 ZFYVE21Q9BQ24 234 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 PSD2Q9BQI7 771 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 SPATA5L1Q9BVQ7 753 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 WSB2Q9NYS7 404 aaPredicted RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 TMEM9Q9P0T7 183 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 ENOPH1Q9UHY7 261 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 KCND3Q9UK17 655 aa16.09■□□□□ 0.17
PTPRO-209ENST00000543886 GPC6Q9Y625 555 aaPredicted RBP16.09■□□□□ 0.17
PTPRO-209ENST00000543886 A0A1W2PS29 197 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 PRAMEF27A3QJZ7 478 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 ARRDC5A6NEK1 342 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 E9PQ18 207 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 H3BMQ9 156 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 B3GALT2O43825 422 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 CELA2BP08218 269 aaPredicted RBP16.08■□□□□ 0.16
PTPRO-209ENST00000543886 CHRNB1P11230 501 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 MC3RP41968 323 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 GSSP48637 474 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 LIM2P55344 173 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 HPCAP84074 193 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.16
PTPRO-209ENST00000543886 CEBPEQ15744 281 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 DEFB134Q4QY38 66 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 DEF8Q6ZN54 512 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 CCDC71Q8IV32 467 aaPredicted RBP16.08■□□□□ 0.16
PTPRO-209ENST00000543886 COG8Q96MW5 612 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 DOK1Q99704 481 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 IRAK4Q9NWZ3 460 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 PILRAQ9UKJ1 303 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 TMCC3Q9ULS5 477 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 PCDHGA6Q9Y5G7 932 aa16.08■□□□□ 0.16
PTPRO-209ENST00000543886 GOLGA4Q13439 2230 aaKnown RBP16.08■□□□□ 0.16
PTPRO-209ENST00000543886 GGT2P36268 569 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 PXNP49023 591 aaPredicted RBP16.07■□□□□ 0.16
PTPRO-209ENST00000543886 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 AQP11Q8NBQ7 271 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 MIPOL1Q8TD10 442 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF681Q96N22 645 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 FAM210AQ96ND0 272 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 UBE2ZQ9H832 354 aaPredicted RBP16.07■□□□□ 0.16
PTPRO-209ENST00000543886 BCL2L10Q9HD36 194 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 CCNB1IP1Q9NPC3 277 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 HRASLS2Q9NWW9 162 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 ARHGEF17Q96PE2 2063 aaPredicted RBP16.07■□□□□ 0.16
PTPRO-209ENST00000543886 A0A0J9YY10 115 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 A0A1W2PPC4 97 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 TLX1P31314 330 aaPredicted RBP16.07■□□□□ 0.16
PTPRO-209ENST00000543886 KRT20P35900 424 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 BLKP51451 505 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 GPAT3Q53EU6 434 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 FGD3Q5JSP0 725 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 GTF2IRD2BQ6EKJ0 949 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 Q6ZPB1 254 aaPredicted RBP16.07■□□□□ 0.16
PTPRO-209ENST00000543886 GTF2IRD2Q86UP8 949 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 ENTHD1Q8IYW4 607 aa16.07■□□□□ 0.16
PTPRO-209ENST00000543886 SAMD14Q8IZD0 417 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms