RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 LEXMQ3ZCV2 418 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 COLEC12Q5KU26 742 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 DHRS4L2Q6PKH6 230 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 DENND6BQ8NEG7 585 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 ZCCHC10Q8TBK6 192 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 SARGQ9BW04 601 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 ENTPD4Q9Y227 616 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 PCDHGB1Q9Y5G3 927 aa15.41■□□□□ 0.06
COL4A1-204ENST00000543140 A0A0J9YVX5 310 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 TPST2O60704 377 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 BCAS1O75363 584 aaPredicted RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 KCNJ5P48544 419 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 MVKQ03426 396 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 GPR18Q14330 331 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 SEC23BQ15437 767 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 SLC48A1Q6P1K1 146 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 FBXO42Q6P3S6 717 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 NRROSQ86YC3 692 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 SRFBP1Q8NEF9 429 aaKnown RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 OR9A2Q8NGT5 310 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 ZNF576Q9H609 170 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 SEMA3GQ9NS98 782 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 SELENONQ9NZV5 590 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 CES1P1Q9UKY3 287 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 KCNE3Q9Y6H6 103 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 OR6C74A6NCV1 312 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 M0R3H8 397 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 CTSVO60911 334 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 SERPINB7O75635 380 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 BCL10O95999 233 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 CBLP22681 906 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 CALRP27797 417 aaKnown RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 C21orf33P30042 268 aaPredicted RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 LSM3P62310 102 aaKnown RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 EOGTQ5NDL2 527 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 KLHL17Q6TDP4 642 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 WDR53Q7Z5U6 358 aaPredicted RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 OR13H1Q8NG92 308 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 KAT2AQ92830 837 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 ZNF354BQ96LW1 612 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 NECTIN4Q96NY8 510 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 OR2A14Q96R47 310 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 QRSL1Q9H0R6 528 aaKnown RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 TCEAL2Q9H3H9 227 aaPredicted RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 C6orf106Q9H6K1 298 aaPredicted RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 GPN2Q9H9Y4 310 aaPredicted RBP15.4■□□□□ 0.06
COL4A1-204ENST00000543140 ACOT13Q9NPJ3 140 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 ETAA1Q9NY74 926 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 ZNF226Q9NYT6 803 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 ENPP5Q9UJA9 477 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 KCND3Q9UK17 655 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 PCOLCE2Q9UKZ9 415 aa15.4■□□□□ 0.06
COL4A1-204ENST00000543140 COL4A2P08572 1712 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 A6NCN8 305 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 SEMA4FO95754 770 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 LCKP06239 509 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 CSNK2A2P19784 350 aaPredicted RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 PPP2R1BP30154 601 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 MC3RP41968 323 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 PIN1Q13526 163 aaPredicted RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 PTGES3Q15185 160 aaKnown RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 LTB4RQ15722 352 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 ASPGQ86U10 573 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 TRIM48Q8IWZ4 208 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 RHOXF1Q8NHV9 184 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 FLVCR1-AS1Q8TAF5 88 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 TBC1D15Q8TC07 691 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 COPS4Q9BT78 406 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 IMPAD1Q9NX62 359 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 NDRG2Q9UN36 371 aaKnown RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 DNAJB6O75190 326 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 CHRM4P08173 479 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 UGT2B7P16662 529 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 ALDH4A1P30038 563 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 AKT2P31751 481 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 KHKP50053 298 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 RPS15AP62244 130 aaKnown RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 FUT5Q11128 374 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 CTF1Q16619 201 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 DEFB134Q4QY38 66 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 GPAT3Q53EU6 434 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 ZNF770Q6IQ21 691 aaPredicted RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 PRSS48Q7RTY5 328 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 COL26A1Q96A83 441 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 C8orf33Q9H7E9 229 aaPredicted RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 CCNB1IP1Q9NPC3 277 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 ZSCAN32Q9NX65 697 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 TMCC3Q9ULS5 477 aa15.39■□□□□ 0.05
COL4A1-204ENST00000543140 GPC6Q9Y625 555 aaPredicted RBP15.39■□□□□ 0.05
COL4A1-204ENST00000543140 P2RX6O15547 441 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 MPIP34949 423 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 CTSKP43235 329 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 EMP3P54852 163 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 OCA2Q04671 838 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 Q6ZS52 159 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 KRT73Q86Y46 540 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 ANKRD13BQ86YJ7 626 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 CTPS2Q9NRF8 586 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 GPR83Q9NYM4 423 aa15.38■□□□□ 0.05
COL4A1-204ENST00000543140 DUSP12Q9UNI6 340 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms