RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ARGFXA6NJG6 315 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 OR6C76A6NM76 312 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 PLOD2O00469 737 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 RNASET2O00584 256 aaKnown RBP11.36□□□□□ -0.59
DDX55-210ENST00000543016 SLC22A2O15244 555 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 SNX3O60493 162 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 PLOD3O60568 738 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 CCDC22O60826 627 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 CEACAM4O75871 244 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 LAMP1P11279 417 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 NCF2P19878 526 aaPredicted RBP11.36□□□□□ -0.59
DDX55-210ENST00000543016 S100A3P33764 101 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 NCBP2P52298 156 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDX55-210ENST00000543016 MANFP55145 182 aaKnown RBP11.36□□□□□ -0.59
DDX55-210ENST00000543016 UFM1P61960 85 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 FUT7Q11130 342 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 PRICKLE4Q2TBC4 344 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 BTBD16Q32M84 506 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 ATP1A1-AS1Q5TC04 95 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 TMEM198Q66K66 360 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 GALNT16Q8N428 558 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 KRTCAP2Q8N6L1 136 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 OR7A2PQ8NGA2 310 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 OR5L2Q8NGL0 311 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 SLC2A12Q8TD20 617 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 ELP5Q8TE02 316 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 C10orf82Q8WW14 230 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 THOC1Q96FV9 657 aaKnown RBP11.36□□□□□ -0.59
DDX55-210ENST00000543016 SENP5Q96HI0 755 aaPredicted RBP11.36□□□□□ -0.59
DDX55-210ENST00000543016 AMDHD1Q96NU7 426 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 ELAC2Q9BQ52 826 aaKnown RBP11.36□□□□□ -0.59
DDX55-210ENST00000543016 LHPPQ9H008 270 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 NEUROD4Q9HD90 331 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 PTGFRNQ9P2B2 879 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 TEKT2Q9UIF3 430 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 PCDHGB4Q9UN71 923 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 PCDHGB7Q9Y5F8 929 aa11.36□□□□□ -0.59
DDX55-210ENST00000543016 IGHV3-20A0A0C4DH32 117 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 A0A1W2PRB8 838 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 TTC36A6NLP5 189 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 A8MUA0 341 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ZFAND5O76080 213 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 SOX30O94993 753 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 DDAH2O95865 285 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 FAM107AO95990 144 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 IGKV3-11P04433 115 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ALPPP05187 535 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PGRP06401 933 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 GPX3P22352 226 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ITGA3P26006 1051 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 POLR2JP52435 117 aaKnown RBP11.35□□□□□ -0.59
DDX55-210ENST00000543016 PSPHP78330 225 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 CHAF1BQ13112 559 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ZNF267Q14586 743 aaPredicted RBP11.35□□□□□ -0.59
DDX55-210ENST00000543016 MYBPC3Q14896 1274 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PGS1Q32NB8 556 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ZNF628Q5EBL2 1059 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 H3F3CQ6NXT2 135 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 BHLHB9Q6PI77 547 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 HSDL2Q6YN16 418 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PIGWQ7Z7B1 504 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 HPS6Q86YV9 775 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ARMC10Q8N2F6 343 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 SLC5A8Q8N695 610 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PSMA8Q8TAA3 256 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 SUN3Q8TAQ9 357 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ZNF721Q8TF20 911 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PPWD1Q96BP3 646 aaKnown RBP11.35□□□□□ -0.59
DDX55-210ENST00000543016 MOAP1Q96BY2 351 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 OR8D2Q9GZM6 311 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 GLIPR2Q9H4G4 154 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 RMND5AQ9H871 391 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 MAT2BQ9NZL9 334 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PRODH2Q9UF12 536 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 ZNF639Q9UID6 485 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 BTNL2Q9UIR0 455 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 TUBD1Q9UJT1 453 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 PCDHGA9Q9Y5G4 932 aaKnown RBP11.35□□□□□ -0.59
DDX55-210ENST00000543016 COPG1Q9Y678 874 aaKnown RBP11.35□□□□□ -0.59
DDX55-210ENST00000543016 CROCCQ5TZA2 2017 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 SCN2AQ99250 2005 aa11.35□□□□□ -0.59
DDX55-210ENST00000543016 CFLARO15519 480 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 PRAMEF2O60811 474 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 COQ9O75208 318 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 SFTPCP11686 197 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 GPC1P35052 558 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 PGDP52209 483 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 KCNK10P57789 538 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 DCAF7P61962 342 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 MGAT2Q10469 447 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 TBR1Q16650 682 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 PRSS53Q2L4Q9 553 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 MPEG1Q2M385 716 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 ZNF750Q32MQ0 723 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 FAM174BQ3ZCQ3 159 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 ZNF385BQ569K4 471 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 CRB2Q5IJ48 1285 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 SPANXN4Q5MJ08 99 aa11.34□□□□□ -0.59
DDX55-210ENST00000543016 AGAP7PQ5VUJ5 663 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms