RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MIXL1Q9H2W2 232 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 RC3H2Q9HBD1 1191 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 TM7SF3Q9NS93 570 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 SEC14L3Q9UDX4 400 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 TAC3Q9UHF0 121 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 MAU2Q9Y6X3 613 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 PIPSLA2A3N6 862 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 HEPACAM2A8MVW5 462 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 B4DXG7 233 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 CHRNB1P11230 501 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 OSMP13725 252 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 GALK2Q01415 458 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 ALDH6A1Q02252 535 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 SP140Q13342 867 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 GINS1Q14691 196 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 ZNF630Q2M218 657 aaPredicted RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 CDKL4Q5MAI5 379 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 TRIQKQ629K1 86 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 REEP3Q6NUK4 255 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 YIPF7Q8N8F6 280 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 C19orf18Q8NEA5 215 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 OR5AR1Q8NGP9 310 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 SLC9A6Q92581 669 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 FCRL1Q96LA6 429 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 LYSMD1Q96S90 227 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 MND1Q9BWT6 205 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 RSPO3Q9BXY4 272 aaPredicted RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 BHLHE41Q9C0J9 482 aaPredicted RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 TEKT2Q9UIF3 430 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 NDRG2Q9UN36 371 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 PCDHGB2Q9Y5G2 931 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 PCM1Q15154 2024 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 A0A0B4J293 547 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 GSAPA4D1B5 854 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 HMX3A6NHT5 357 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 ANHXE9PGG2 379 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 FRS3O43559 492 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 PSIP1O75475 530 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 RECKO95980 971 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 H1F0P07305 194 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 PSMB5P28074 263 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 GPLD1P80108 840 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 IL18Q14116 193 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 DHCR24Q15392 516 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 LAS2Q8IYD9 372 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 CPA6Q8N4T0 437 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 GPR32P1Q8NGA4 272 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 OR52P1PQ8NH57 321 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 RNF31Q96EP0 1072 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 CPEB1Q9BZB8 566 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 CNOT2Q9NZN8 540 aaKnown RBP14.53□□□□□ -0.08
CNOT9-208ENST00000542068 GULP1Q9UBP9 304 aa14.53□□□□□ -0.08
CNOT9-208ENST00000542068 ZNF670-ZNF695F2Z2N8 137 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 UGT2B17O75795 530 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 EPHX1P07099 455 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 CEBPBP17676 345 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 SOX18P35713 384 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 P2RY14Q15391 338 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 RNASE12Q5GAN4 147 aaKnown RBP14.52□□□□□ -0.08
CNOT9-208ENST00000542068 TCTN3Q6NUS6 607 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 LAPTM4BQ86VI4 370 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 IQCHQ86VS3 1027 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 SLC7A13Q8TCU3 470 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 JPH3Q8WXH2 748 aaPredicted RBP14.52□□□□□ -0.08
CNOT9-208ENST00000542068 NXPE3Q969Y0 559 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 TRIM43Q96BQ3 446 aaPredicted RBP14.52□□□□□ -0.08
CNOT9-208ENST00000542068 C11orf24Q96F05 449 aaPredicted RBP14.52□□□□□ -0.08
CNOT9-208ENST00000542068 F2RL3Q96RI0 385 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 QRSL1Q9H0R6 528 aaKnown RBP14.52□□□□□ -0.08
CNOT9-208ENST00000542068 C3orf14Q9HBI5 128 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 THSD1Q9NS62 852 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 GRIP1Q9Y3R0 1128 aa14.52□□□□□ -0.08
CNOT9-208ENST00000542068 RPL36Q9Y3U8 105 aaKnown RBP14.52□□□□□ -0.08
CNOT9-208ENST00000542068 A0A075B6Q4 140 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 SH3D21A4FU49 640 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 E9PQ18 207 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 HPGDSO60760 199 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 YES1P07947 543 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 NPPBP16860 134 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 ZNF30P17039 623 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 DDOSTP39656 456 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 FCHO2Q0JRZ9 810 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 SYPL1Q16563 259 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 ZNF57Q68EA5 555 aaPredicted RBP14.52□□□□□ -0.09
CNOT9-208ENST00000542068 ACSM5Q6NUN0 579 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 TRAM1L1Q8N609 369 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 XKR8Q9H6D3 395 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 SLAMF7Q9NQ25 335 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 DMRT3Q9NQL9 472 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 TAAR2Q9P1P5 351 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 TBX21Q9UL17 535 aa14.52□□□□□ -0.09
CNOT9-208ENST00000542068 IGLV3-16A0A075B6K0 115 aa14.51□□□□□ -0.09
CNOT9-208ENST00000542068 LOC102723532A0A0G2JNH3 316 aa14.51□□□□□ -0.09
CNOT9-208ENST00000542068 C2orf92A0A1B0GVN3 265 aa14.51□□□□□ -0.09
CNOT9-208ENST00000542068 H7BY64 318 aa14.51□□□□□ -0.09
CNOT9-208ENST00000542068 ERAL1O75616 437 aaKnown RBP14.51□□□□□ -0.09
CNOT9-208ENST00000542068 ARAFP10398 606 aa14.51□□□□□ -0.09
CNOT9-208ENST00000542068 MYL12AP19105 171 aa14.51□□□□□ -0.09
CNOT9-208ENST00000542068 PTX3P26022 381 aaPredicted RBP14.51□□□□□ -0.09
CNOT9-208ENST00000542068 ELAVL4P26378 380 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms