RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CPNE3O75131 537 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 CYP17A1P05093 508 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 PVRP15151 417 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 TIAL1Q01085 375 aaKnown RBP eCLIP15.31■□□□□ 0.04
VARS2-212ENST00000542001 MTFR2Q6P444 385 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 BORAQ6PGQ7 559 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 POMGNT2Q8NAT1 580 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 OR5M3Q8NGP4 307 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 TRMT2BQ96GJ1 504 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 OR5M11Q96RB7 305 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 NTN4Q9HB63 628 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 PCDHGA10Q9Y5H3 936 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 MYOFQ9NZM1 2061 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 GKN3PP0CG01 181 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 RHCEP18577 417 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 ACADLP28330 430 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 MICAQ29983 383 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 ADPRMQ3LIE5 342 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 KLHL22Q53GT1 634 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 OR2G6Q5TZ20 316 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 ZNF517Q6ZMY9 492 aaPredicted RBP15.3■□□□□ 0.04
VARS2-212ENST00000542001 RANBP3LQ86VV4 465 aaPredicted RBP15.3■□□□□ 0.04
VARS2-212ENST00000542001 KLBQ86Z14 1044 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 SLC7A5P1Q8MH63 180 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 PLA2G15Q8NCC3 412 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 RFKQ969G6 155 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 DTD2Q96FN9 168 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 HS3ST2Q9Y278 367 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 TRAV6A0A075B6T7 132 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 BLOC1S5-TXNDC5H3BN57 136 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 PSMD9O00233 223 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 RFXAPO00287 272 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 VSX2P58304 361 aaPredicted RBP15.3■□□□□ 0.04
VARS2-212ENST00000542001 TOMM20Q15388 145 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 MRPL43Q8N983 215 aaKnown RBP15.3■□□□□ 0.04
VARS2-212ENST00000542001 OR9A2Q8NGT5 310 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 NXPE3Q969Y0 559 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 SLC25A36Q96CQ1 311 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 C16orf58Q96GQ5 468 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 CENPOQ9BU64 300 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 MMP27Q9H306 513 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 HRASLS2Q9NWW9 162 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 AP1G1O43747 822 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 GASTP01350 101 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 GCGRP47871 477 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 SLC7A9P82251 487 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 B4GALNT1Q00973 533 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 FRMPD2BQ6IN97 320 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 BTLAQ7Z6A9 289 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 NRMQ8IXM6 262 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 GGHQ92820 318 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 FGF13Q92913 245 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 TM9SF2Q99805 663 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 BHLHE41Q9C0J9 482 aaPredicted RBP15.3■□□□□ 0.04
VARS2-212ENST00000542001 SLC35C2Q9NQQ7 365 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 SNX11Q9Y5W9 270 aa15.3■□□□□ 0.04
VARS2-212ENST00000542001 TCRBV5S2A0A599 114 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 OR6C74A6NCV1 312 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 KHDRBS3O75525 346 aaKnown RBP15.29■□□□□ 0.04
VARS2-212ENST00000542001 PPP2R2BQ00005 443 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 CST6Q15828 149 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 FAM214AQ32MH5 1076 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 LCN1P1Q5VSP4 162 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 ALG1LQ6GMV1 187 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 LRRC17Q8N6Y2 441 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 BBS10Q8TAM1 723 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 FAM171A2A8MVW0 826 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 LATS1O95835 1130 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 BMP4P12644 408 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 DCKP27707 260 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 PXNP49023 591 aaPredicted RBP15.29■□□□□ 0.04
VARS2-212ENST00000542001 ISL1P61371 349 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 E2F2Q14209 437 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 HYAL4Q2M3T9 481 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 SLC27A4Q6P1M0 643 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 SLCO4C1Q6ZQN7 724 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 ANKRD13BQ86YJ7 626 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 C9orf43Q8TAL5 461 aaPredicted RBP15.29■□□□□ 0.04
VARS2-212ENST00000542001 ARRDC3Q96B67 414 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 CXorf36Q9H7Y0 433 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 FBXL21Q9UKT6 434 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 FUCA1P04066 466 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 HSD3B1P14060 373 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 HSD3B2P26439 372 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 LIPAP38571 399 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 C10orf111Q8N326 155 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 TESCQ96BS2 214 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 CRELD1Q96HD1 420 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 IFT52Q9Y366 437 aa15.29■□□□□ 0.04
VARS2-212ENST00000542001 ZFC3H1O60293 1989 aaKnown RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 CARNS1A5YM72 827 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 FAM172BPA6NC97 362 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 GYPBP06028 91 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 GABRA3P34903 492 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 RBBP4Q09028 425 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 WSCD2Q2TBF2 565 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 HNRNPA1L2Q32P51 320 aaKnown RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 NCCRP1Q6ZVX7 275 aaPredicted RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 Q8N9G6 341 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms