RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 APOA1P02647 267 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FUT1P19526 365 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 DUSP2Q05923 314 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 KHDRBS2Q5VWX1 349 aaKnown RBP13.37□□□□□ -0.27
INO80E-203ENST00000540562 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 ATCAYQ86WG3 371 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FCGR1BQ92637 280 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 BBS4Q96RK4 519 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 SDHCQ99643 169 aaPredicted RBP13.37□□□□□ -0.27
INO80E-203ENST00000540562 TMEM245Q9H330 911 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 SMURF1Q9HCE7 757 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 PLSCR3Q9NRY6 295 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 PCDHGA3Q9Y5H0 932 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 IFNA14P01570 189 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 HSD3B1P14060 373 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 HSD3B2P26439 372 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 ETV5P41161 510 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 CASP3P42574 277 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 ETV1P50549 477 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SNRPNP63162 240 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 SLAMF1Q13291 335 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 C18orf63Q68DL7 685 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 PGBD3Q8N328 593 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 DENND6BQ8NEG7 585 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 OR4K5Q8NGD3 323 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TMED9Q9BVK6 235 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 FBXL12Q9NXK8 326 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SPATA7Q9P0W8 599 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 CLEC4AQ9UMR7 237 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 ZC3H12DA2A288 527 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 ZAR1LA6NP61 321 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 HEPACAM2A8MVW5 462 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 HAT1O14929 419 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 LILRB5O75023 590 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 KRT8P05787 483 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 CLTBP09497 229 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 PTX3P26022 381 aaPredicted RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 SDC2P34741 201 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 GSTM5P46439 218 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TUBA1BP68363 451 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 LTB4RQ15722 352 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 NDUFAF5Q5TEU4 345 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SLC30A6Q6NXT4 461 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TUBA1AQ71U36 451 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TMEM145Q8NBT3 493 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 RAD51AP1Q96B01 352 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TEFMQ96QE5 360 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 DPH7Q9BTV6 452 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 HDHD5Q9BXW7 423 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 MYNNQ9NPC7 610 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 MBNL1Q9NR56 388 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
INO80E-203ENST00000540562 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 A0A1W2PQ09 198 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 TMCC2O75069 709 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 UQCRC2P22695 453 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 MMP11P24347 488 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 PSMA1P25786 263 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 MAGEA8P43361 318 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 GPR4P46093 362 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 VEGFBP49765 207 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SLC16A1P53985 500 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SEC13P55735 322 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 HEPACAMQ14CZ8 416 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 ZNF77Q15935 545 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 RNASE12Q5GAN4 147 aaKnown RBP13.36□□□□□ -0.27
INO80E-203ENST00000540562 PGBD2Q6P3X8 592 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 KRT78Q8N1N4 520 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 CXorf40AQ8TE69 158 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SMPDL3AQ92484 453 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 RELTQ969Z4 430 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 DIRAS2Q96HU8 199 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SGPP1Q9BX95 441 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 NEK6Q9HC98 313 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 SERGEFQ9UGK8 458 aa13.36□□□□□ -0.27
INO80E-203ENST00000540562 BRWD1Q9NSI6 2320 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 TRANK1O15050 2925 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 DDCP20711 480 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 PCBP3P57721 371 aaKnown RBP13.35□□□□□ -0.27
INO80E-203ENST00000540562 CD83Q01151 205 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 ZNF234Q14588 700 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 TMEM31Q5JXX7 168 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 TMPRSS11AQ6ZMR5 421 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 ZER1Q7Z7L7 766 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 NLRP8Q86W28 1048 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 VRK2Q86Y07 508 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 TBC1D20Q96BZ9 403 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 FAM46AQ96IP4 442 aaKnown RBP13.35□□□□□ -0.27
INO80E-203ENST00000540562 DCLRE1CQ96SD1 692 aaKnown RBP13.35□□□□□ -0.27
INO80E-203ENST00000540562 RHBGQ9H310 441 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 MKLN1Q9UL63 735 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 GPR55Q9Y2T6 319 aaPredicted RBP13.35□□□□□ -0.27
INO80E-203ENST00000540562 UGT2A1Q9Y4X1 527 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 OBSL1O75147 1896 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 WDFY3Q8IZQ1 3526 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 C2orf92A0A1B0GVN3 265 aa13.35□□□□□ -0.27
INO80E-203ENST00000540562 ZNF860A6NHJ4 632 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms