RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 GRHL2Q6ISB3 625 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CYP20A1Q6UW02 462 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 DGAT2L6Q6ZPD8 337 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CAPN12Q6ZSI9 719 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 TAOK1Q7L7X3 1001 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 LINC01560Q8TB33 94 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 RILPQ96NA2 401 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CPNE1Q99829 537 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 SORBS1Q9BX66 1292 aaKnown RBP11.44□□□□□ -0.58
COPS7A-211ENST00000540408 TRIM31Q9BZY9 425 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CALHM2Q9HA72 323 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 NPFFR2Q9Y5X5 522 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 ARHGAP21Q5T5U3 1957 aa11.44□□□□□ -0.58
COPS7A-211ENST00000540408 CLCA1A8K7I4 914 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 EFCAB8A8MWE9 144 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SUPT3HB4E1H0 165 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 E7ESA3 106 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 ARHGEF9O43307 516 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 ZSCAN12O43309 604 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 ERN1O75460 977 aaKnown RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SUPT3HO75486 399 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 WISP3O95389 354 aaPredicted RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SLC35E2BP0CK96 405 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SLC35E2P0CK97 266 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 KRT15P19012 456 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 EPORP19235 508 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 AGFG1P52594 562 aaKnown RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 RAB10P61026 200 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 FASTKD3Q14CZ7 662 aaKnown RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SETDB1Q15047 1291 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 PCBP2Q15366 365 aaKnown RBP eCLIP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 NHSL2Q5HYW2 709 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SHEQ5VZ18 495 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 RAPH1Q70E73 1250 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 HUS1BQ8NHY5 278 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SPPL2AQ8TCT8 520 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 DOK4Q8TEW6 326 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 ABTB1Q969K4 478 aaPredicted RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 REPS1Q96D71 796 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 UBXN10Q96LJ8 280 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 GNRHR2Q96P88 292 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 GPR22Q99680 433 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 RBBP8Q99708 897 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 MCMBPQ9BTE3 642 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 ANGPTL4Q9BY76 406 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 ALG9Q9H6U8 611 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 BEX4Q9NWD9 120 aaPredicted RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 TRMT1Q9NXH9 659 aaKnown RBP11.43□□□□□ -0.58
COPS7A-211ENST00000540408 NUDT4Q9NZJ9 180 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 C15orf41Q9Y2V0 281 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 SLC6A5Q9Y345 797 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 PCDHGA11Q9Y5H2 935 aa11.43□□□□□ -0.58
COPS7A-211ENST00000540408 AKAP6Q13023 2319 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 MBD3L4A6NDZ8 208 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 MBD3L3A6NE82 208 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 MBD3L5A6NJ08 208 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 GLOD5A6NK44 160 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 PLPP1O14494 284 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 PIAS1O75925 651 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 ACTL6AO96019 429 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 FAM58BPP0C7Q3 252 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 NR2F6P10588 404 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 CYP4B1P13584 511 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 BMP7P18075 431 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 PIK3R1P27986 724 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 HOXC12P31275 282 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 SPRP35270 261 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 GP5P40197 560 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 HNRNPH2P55795 449 aaKnown RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 FBXW4P57775 412 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 DCAF7P61962 342 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 NKX6-1P78426 367 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 LIPJQ5W064 366 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 POMZP3Q6PJE2 187 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 SCIMPQ6UWF3 145 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 Q71RC1 249 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 TBC1D1Q86TI0 1168 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 TEX9Q8N6V9 391 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 OR1J4Q8NGS1 313 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 MBD3L2Q8NHZ7 208 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 ZPLD1Q8TCW7 415 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 ISL2Q96A47 359 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 WDYHV1Q96HA8 205 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 TMEM41AQ96HV5 264 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 DACH2Q96NX9 599 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 MTERF1Q99551 399 aaKnown RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 RBM24Q9BX46 236 aaKnown RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 PLEKHF2Q9H8W4 249 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 ACTR8Q9H981 624 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 TEX10Q9NXF1 929 aaPredicted RBP11.42□□□□□ -0.58
COPS7A-211ENST00000540408 NDRG3Q9UGV2 375 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 TSC22D4Q9Y3Q8 395 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 ABCA2Q9BZC7 2435 aa11.42□□□□□ -0.58
COPS7A-211ENST00000540408 NINQ8N4C6 2090 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 A0A1B0GTL3 188 aa11.41□□□□□ -0.58
COPS7A-211ENST00000540408 SYCE1LA8MT33 242 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms