RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ERVK-11Q9UQG0 969 aa12.42□□□□□ -0.42
CCDC130-202ENST00000540216 TMED5Q9Y3A6 229 aa12.42□□□□□ -0.42
CCDC130-202ENST00000540216 FIS1Q9Y3D6 152 aa12.42□□□□□ -0.42
CCDC130-202ENST00000540216 CCL27Q9Y4X3 112 aa12.42□□□□□ -0.42
CCDC130-202ENST00000540216 A0A1W2PS29 197 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 TMEM114B3SHH9 223 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 HRKO00198 91 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 SEC22BO75396 215 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 CBX6O95503 412 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 SERPINE1P05121 402 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 NT5EP21589 574 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 GRK2P25098 689 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 MAP4K2Q12851 820 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 EBPQ15125 230 aaKnown RBP12.41□□□□□ -0.42
CCDC130-202ENST00000540216 MAPKAPK3Q16644 382 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 UGT3A2Q3SY77 523 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 PIGGQ5H8A4 983 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 SH2D4BQ5SQS7 431 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 NOXRED1Q6NXP6 359 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 GALNTL5Q7Z4T8 443 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 KIRREL3Q8IZU9 778 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 MMP21Q8N119 569 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 POGLUT1Q8NBL1 392 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 C17orf47Q8NEP4 570 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC130-202ENST00000540216 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 SGCZQ96LD1 299 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 ZNF681Q96N22 645 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 CCT7Q99832 543 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 EBPLQ9BY08 206 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 WWTR1Q9GZV5 400 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 TUBB1Q9H4B7 451 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 KCNK9Q9NPC2 374 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 PFDN4Q9NQP4 134 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 TAS2R7Q9NYW3 318 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 CFL2Q9Y281 166 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 ESPL1Q14674 2120 aa12.41□□□□□ -0.42
CCDC130-202ENST00000540216 FLNCQ14315 2725 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 CLEC18AA5D8T8 446 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 KLRC4-KLRK1H3BQV0 150 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 OR6B1O95007 311 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 HSPA4LO95757 839 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 DDCP20711 480 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 SSTR4P31391 388 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 FEN1P39748 380 aaKnown RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 SOX3P41225 446 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 ST13P50502 369 aaKnown RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 TDGF1P3P51864 188 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 SLC18A1P54219 525 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 MRPL49Q13405 166 aaKnown RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 KIAA0040Q15053 153 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 PRICKLE4Q2TBC4 344 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 ZNF750Q32MQ0 723 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 FAM71E1Q6IPT2 247 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 CLEC18BQ6UXF7 455 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 C16orf47Q6ZP98 133 aaPredicted RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 RTL4Q6ZR62 310 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 Q6ZSR9 355 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 DDIASQ8IXT1 998 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 CLEC18CQ8NCF0 446 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 PSD4Q8NDX1 1056 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 ZNF675Q8TD23 568 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 TP53INP1Q96A56 240 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 EXOSC8Q96B26 276 aaKnown RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 CTHRC1Q96CG8 243 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 CNRIP1Q96F85 164 aaPredicted RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 ZNF764Q96H86 408 aaPredicted RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 PKNOX2Q96KN3 472 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 FCRL1Q96LA6 429 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 FRMD6Q96NE9 622 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 GAL3ST4Q96RP7 486 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 HES7Q9BYE0 225 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 LIN28AQ9H9Z2 209 aaKnown RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 MIEF1Q9NQG6 463 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 SLC35C2Q9NQQ7 365 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 ENTPD4Q9Y227 616 aa12.4□□□□□ -0.42
CCDC130-202ENST00000540216 POLR3HQ9Y535 204 aaPredicted RBP12.4□□□□□ -0.42
CCDC130-202ENST00000540216 LRRK2Q5S007 2527 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 C2orf92A0A1B0GVN3 265 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 TMEM233B4DJY2 109 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 PIP5K1BO14986 540 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 LSM1O15116 133 aaKnown RBP12.39□□□□□ -0.43
CCDC130-202ENST00000540216 SLITRK5O94991 958 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 CLPSP04118 112 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 CT62P0C5K7 136 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 LINC00032P0C843 101 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 ARRB2P32121 409 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 MPIP34949 423 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 C2orf80Q0P641 193 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 CASP8Q14790 479 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 CEBPEQ15744 281 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 CHI3L2Q15782 390 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 XKR7Q5GH72 579 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 FHL5Q5TD97 284 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 HLA-DQA1Q5Y7H0 255 aa12.39□□□□□ -0.43
CCDC130-202ENST00000540216 IL20RBQ6UXL0 311 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms