RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TRPC1P48995 793 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 NUDT2P50583 147 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TGIF1Q15583 401 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ZSCAN26Q16670 478 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 LRIF1Q5T3J3 769 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 C19orf48Q6RUI8 117 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CCDC121Q6ZUS5 278 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 LANCL3Q6ZV70 420 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PCYOX1LQ8NBM8 494 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ADCY4Q8NFM4 1077 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 OR2Y1Q8NGV0 311 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 GOT1L1Q8NHS2 421 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SNIP1Q8TAD8 396 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DOK4Q8TEW6 326 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 MESP1Q9BRJ9 268 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CXorf36Q9H7Y0 433 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 IL1RL2Q9HB29 575 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SIRT3Q9NTG7 399 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 RALYQ9UKM9 306 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 FARSAQ9Y285 508 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SEC16AO15027 2179 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 A0A096LPI6 279 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 B2RBV5 119 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 FXYD1O00168 92 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 OR10H2O60403 315 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 UNC5CO95185 931 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 KCNH1O95259 989 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 HOXB9P17482 250 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SOX18P35713 384 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 EIF2S3P41091 472 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 STT3AP46977 705 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 MNAT1P51948 309 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 RPS18P62269 152 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 BIKQ13323 160 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DNASE1L3Q13609 305 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 RINLQ6ZS11 566 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DHDDSQ86SQ9 333 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 MSRB3Q8IXL7 192 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PSMA8Q8TAA3 256 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 FGF11Q92914 225 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 RBM18Q96H35 190 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ZNF578Q96N58 590 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DCBLD2Q96PD2 775 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DGAT2Q96PD7 388 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 NEUROD4Q9HD90 331 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PNO1Q9NRX1 252 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SLC25A37Q9NYZ2 338 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TCFL5Q9UL49 500 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SDK2Q58EX2 2172 aa17.69■□□□□ 0.42
TNFRSF1A-213ENST00000540022 C21orf140B9A014 251 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ERN1O75460 977 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 IFNA16P05015 189 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CYC1P08574 325 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CD63P08962 238 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CT62P0C5K7 136 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 NT5EP21589 574 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 GPC1P35052 558 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DLSTP36957 453 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 MRPS35P82673 323 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 GAB1Q13480 694 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ART3Q13508 389 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CAPRIN1Q14444 709 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PRICKLE4Q2TBC4 344 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TRMT5Q32P41 509 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 FAM111BQ6SJ93 734 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ZNF621Q6ZSS3 439 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 CLEC4FQ8N1N0 589 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 KAT2AQ92830 837 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SLC7A6OSQ96CW6 309 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 NAF1Q96HR8 494 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SLC39A3Q9BRY0 314 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 MAT2BQ9NZL9 334 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 VAPAQ9P0L0 249 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PADI2Q9Y2J8 665 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PCDHB14Q9Y5E9 798 aa17.68■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TRBV5-3A0A0A0MS03 114 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 A8MUA0 341 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ANP32DO95626 131 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 C1QCP02747 245 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ZCCHC18P0CG32 403 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 LIPCP11150 499 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PTPN4P29074 926 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 FOLR3P41439 243 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 RPS15P62841 145 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 SLC25A3Q00325 362 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 MGAT2Q10469 447 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 COL28A1Q2UY09 1125 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ZNF628Q5EBL2 1059 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TMEM205Q6UW68 189 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TMEM107Q6UX40 140 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 HACD2Q6Y1H2 254 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ANKRD37Q7Z713 158 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 IL22RA1Q8N6P7 574 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 RBM15BQ8NDT2 890 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 DNAJB8Q8NHS0 232 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 METTL21AQ8WXB1 218 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 LRRC58Q96CX6 371 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ELP4Q96EB1 424 aa17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 AURKBQ96GD4 344 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PHF12Q96QT6 1004 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms