RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 MASP1P48740 699 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 TMED10P49755 219 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 CDK9P50750 372 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 ARFIP1P53367 373 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 HNRNPH2P55795 449 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 WNT3P56703 355 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 SLC37A1P57057 533 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 RPP38P78345 283 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 DR1Q01658 176 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CBLBQ13191 982 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 DDX39BQ13838 428 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 ZNF267Q14586 743 aaPredicted RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 ZKSCAN8Q15776 578 aaPredicted RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 NHSL2Q5HYW2 709 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 C18orf63Q68DL7 685 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 VASNQ6EMK4 673 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 GRHL2Q6ISB3 625 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 KLHL7Q8IXQ5 586 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 ZBED8Q8IZ13 594 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 ZNF441Q8N8Z8 693 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 WFDC11Q8NEX6 87 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 HUS1BQ8NHY5 278 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CDKL2Q92772 493 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 RIT1Q92963 219 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 UBXN10Q96LJ8 280 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 RILPQ96NA2 401 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 SECISBP2Q96T21 854 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 RBBP8Q99708 897 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 TIMP4Q99727 224 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CPNE1Q99829 537 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 UBQLN3Q9H347 655 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 PLEKHF2Q9H8W4 249 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CAB39LQ9H9S4 337 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CALHM2Q9HA72 323 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 NEUROD4Q9HD90 331 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 SNX15Q9NRS6 342 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 LYARQ9NX58 379 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 TXNDC16Q9P2K2 825 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 OPTCQ9UBM4 332 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CAMK2AQ9UQM7 478 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 TSC22D4Q9Y3Q8 395 aa7.44□□□□□ -1.22
CD4-209ENST00000539492 CHD3Q12873 2000 aaKnown RBP7.44□□□□□ -1.22
CD4-209ENST00000539492 RAI1Q7Z5J4 1906 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 PLCE1Q9P212 2302 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 A0A0A6YYD5 115 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 C2orf92A0A1B0GVN3 265 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 MBD3L4A6NDZ8 208 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 MBD3L3A6NE82 208 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 MBD3L5A6NJ08 208 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 CLCA1A8K7I4 914 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 EFCAB8A8MWE9 144 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 SUPT3HB4E1H0 165 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 EEF1E1-BLOC1S5C9J1V9 151 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 K7EPI3 171 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 PLPP1O14494 284 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 TP73O15350 636 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 EEF1E1O43324 174 aaKnown RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 KERAO60938 352 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 SUPT3HO75486 399 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 TRAPPC6AO75865 159 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 PIAS1O75925 651 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 CLPSP04118 112 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 GP5P40197 560 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 NRG3P56975 720 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 FBXW4P57775 412 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 RAB10P61026 200 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 DCAF7P61962 342 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 PHEXP78562 749 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 LTBQ06643 244 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 HLA-DQA1Q5Y7H0 255 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 BICRALQ6AI39 1079 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 MRM1Q6IN84 353 aaKnown RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 CAPN12Q6ZSI9 719 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 MBD3L2Q8NHZ7 208 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 LINC01560Q8TB33 94 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 STAG3L4Q8TBR4 150 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 SPPL2AQ8TCT8 520 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 DOK4Q8TEW6 326 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 PYROXD1Q8WU10 500 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 TP53INP1Q96A56 240 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 TMEM41AQ96HV5 264 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 ZFP3Q96NJ6 502 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 YIPF4Q9BSR8 244 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 ZNF717Q9BY31 904 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 UGT2B28Q9BY64 529 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 ANGPTL4Q9BY76 406 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 TRIM31Q9BZY9 425 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 ALG9Q9H6U8 611 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 WDR41Q9HAD4 459 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 BEX4Q9NWD9 120 aaPredicted RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 JKAMPQ9P055 326 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 C15orf41Q9Y2V0 281 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 SLC6A5Q9Y345 797 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 NPFFR2Q9Y5X5 522 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 FREM1Q5H8C1 2179 aa7.43□□□□□ -1.22
CD4-209ENST00000539492 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
CD4-209ENST00000539492 FAM159BA6NKW6 160 aa7.42□□□□□ -1.22
CD4-209ENST00000539492 CXorf49A8MYA2 514 aaPredicted RBP7.42□□□□□ -1.22
CD4-209ENST00000539492 CCDC188H7C350 402 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms