RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 LINC01555Q8NAE3 123 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 TP53I13Q8NBR0 393 aaPredicted RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 MENTQ9BUN1 341 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 POLR2J2Q9GZM3 115 aaKnown RBP11.32□□□□□ -0.6
CPNE8-203ENST00000538596 RHBGQ9H310 441 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 SMURF1Q9HCE7 757 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 MGAT4BQ9UQ53 548 aa11.32□□□□□ -0.6
CPNE8-203ENST00000538596 ATG2BQ96BY7 2078 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 SNRNP200O75643 2136 aaKnown RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 A0A1W2PPV9 198 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 FAAHO00519 579 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 OXSR1O95747 527 aaPredicted RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 EPPINO95925 133 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 DPTQ07507 201 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF234Q14588 700 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 SF3B4Q15427 424 aaKnown RBP eCLIP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 TIMM50Q3ZCQ8 353 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 FLYWCH1Q4VC44 716 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ACSM5Q6NUN0 579 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ZER1Q7Z7L7 766 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 C12orf76Q8N812 135 aaPredicted RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 OR5K2Q8NHB8 316 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 GLIPR2Q9H4G4 154 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 KLHL31Q9H511 634 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ANKRA2Q9H9E1 313 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 MKLN1Q9UL63 735 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 YARS2Q9Y2Z4 477 aaKnown RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 PDZK1P1A8MUH7 402 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 PLD2O14939 933 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 NDUFS4O43181 175 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ASNA1O43681 348 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 UGT2B17O75795 530 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 NR2F1P10589 423 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 PIPP12273 146 aaPredicted RBP11.31□□□□□ -0.6
CPNE8-203ENST00000538596 MMP11P24347 488 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 GPC1P35052 558 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 CTNNB1P35222 781 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 P2RY2P41231 377 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 CCR8P51685 355 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 CLCNKAP51800 687 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 RHAGQ02094 409 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 IQCHQ86VS3 1027 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 IL17RDQ8NFM7 739 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 OR6T1Q8NGN1 323 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 DPH7Q9BTV6 452 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 OR1A2Q9Y585 309 aa11.31□□□□□ -0.6
CPNE8-203ENST00000538596 IGKV1-8A0A0C4DH67 115 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 IGLON5A6NGN9 336 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 SCAMP1O15126 338 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 FRS3O43559 492 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 VEGFDO43915 354 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ETV5P41161 510 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ETV6P41212 452 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ETV1P50549 477 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 BAK1Q16611 211 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 NDUFAF5Q5TEU4 345 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 MFSD4BQ5TF39 518 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ZNF765Q7L2R6 523 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 NUDT13Q86X67 352 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ETFBKMTQ8IXQ9 262 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 TMIEQ8NEW7 156 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 CXorf40AQ8TE69 158 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ASB15Q8WXK1 588 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ZBED6CLQ96FA7 236 aaPredicted RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 DHRS1Q96LJ7 313 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 FUZQ9BT04 418 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 PLA2G12AQ9BZM1 189 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 MAN2C1Q9NTJ4 1040 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ZCCHC3Q9NUD5 404 aaKnown RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 GPR52Q9Y2T5 361 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 IRAK3Q9Y616 596 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 SPTBN5Q9NRC6 3674 aaKnown RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 TRANK1O15050 2925 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 C4orf51C9J302 202 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 SLC9A3R1O14745 358 aaPredicted RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ERAL1O75616 437 aaKnown RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 SEMA3DO95025 777 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 C8orf89P0DMQ9 161 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 DUSP2Q05923 314 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 GINS1Q14691 196 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 ERN2Q76MJ5 926 aaKnown RBP11.3□□□□□ -0.6
CPNE8-203ENST00000538596 SHFQ7M4L6 423 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 TBC1D19Q8N5T2 526 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 NANOGP1Q8N7R0 232 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
CPNE8-203ENST00000538596 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms