RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 SDHDO14521 159 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 KDELR2P33947 212 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 NFE2L1Q14494 772 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 LDLRAD1Q5T700 205 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 IL17RCQ8NAC3 791 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 HOXB13Q92826 284 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 A8MVJ9 347 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 RTCAO00442 366 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 ADH7P40394 386 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 RIDAP52758 137 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 PSMA6P60900 246 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 SIM1P81133 766 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 RPA4Q13156 261 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 MAB21L1Q13394 359 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 GALNT10Q86SR1 603 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 OR4N5Q8IXE1 308 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 BOLLQ8N9W6 283 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 OR14L1PQ8NHC6 308 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 LRRC20Q8TCA0 184 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 SECISBP2Q96T21 854 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 LMAN1LQ9HAT1 526 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 RXFP3Q9NSD7 469 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 CCRL2O00421 344 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 GLDCP23378 1020 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 GRB7Q14451 532 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 ATP6AP1Q15904 470 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF367Q7RTV3 350 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 SCRN2Q96FV2 425 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF350Q9GZX5 532 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 AIG1Q9NVV5 245 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 MARCH4Q9P2E8 410 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 MLXQ9UH92 298 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 PET100P0DJ07 73 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 FDXRP22570 491 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 DEFA5Q01523 94 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 RCAN2Q14206 197 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 MAMDC2Q7Z304 686 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 PITX2Q99697 317 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 SMIM30A4D0T7 59 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 FAM189A1O60320 539 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 NTHL1P78549 312 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 LRRN1Q6UXK5 716 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 TCEAL8Q8IYN2 117 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 NANOS1Q8WY41 292 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 PPP1R14BQ96C90 147 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 ZFYVE21Q9BQ24 234 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 SLC22A31A6NKX4 558 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 RHCEP18577 417 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 HTR1EP28566 365 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 HNRNPA0Q13151 305 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.162e-13■■■■■ 41.4
SCARB1-205ENST00000538291 RHBDD1Q8TEB9 315 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 CPEB1Q9BZB8 566 aaKnown RBP16.05■□□□□ 0.16
SCARB1-205ENST00000538291 ATG5Q9H1Y0 275 aa16.05■□□□□ 0.16
SCARB1-205ENST00000538291 S100A2P29034 98 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 CD83Q01151 205 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 NLGN4XQ8N0W4 816 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 SAMD12Q8N8I0 201 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 OR8J1Q8NGP2 316 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 SPRYD4Q8WW59 207 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 DDIT4LQ96D03 193 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 ZC3H10Q96K80 434 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF317Q96PQ6 595 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 C10orf71Q711Q0 1435 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 GGT3PA6NGU5 568 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 RBBP9O75884 186 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 YES1P07947 543 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 ACTA2P62736 377 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 ACTG2P63267 376 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 GALNT11Q8NCW6 608 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 NEIL3Q8TAT5 605 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 CCDC86Q9H6F5 360 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 EIF3FO00303 357 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 PRAMEF2O60811 474 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 OXSR1O95747 527 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 NDUFV2P19404 249 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 CRTC1Q6UUV9 634 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 LMO3Q8TAP4 145 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 ANKMY1Q9P2S6 941 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 KLHL21Q9UJP4 597 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 SCAMP2O15127 329 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 LILRB3O75022 631 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 SLC35E2BP0CK96 405 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 CDKN2DP55273 166 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 NIPAL4Q0D2K0 466 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 AIMP2Q13155 320 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 EIF2S3LQ2VIR3 472 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 TMEM135Q86UB9 458 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 WDTC1Q8N5D0 677 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 HDAC2Q92769 488 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 TMEM9Q9P0T7 183 aa16.04■□□□□ 0.16
SCARB1-205ENST00000538291 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
SCARB1-205ENST00000538291 M0R036 132 aa16.03■□□□□ 0.16
SCARB1-205ENST00000538291 GKN3PP0CG01 181 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms