RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 GPR150Q8NGU9 434 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 UBE2E3Q969T4 207 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TOE1Q96GM8 510 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SORCS2Q96PQ0 1159 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FYTTD1Q96QD9 318 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 OR51I1Q9H343 314 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SAGE1Q9NXZ1 904 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SMIM28A0A1B0GU29 152 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 J3QLW9 94 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PSMD9O00233 223 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PTP4A3O75365 173 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SERPINA3P01011 423 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 EPOP01588 193 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ALDOCP09972 364 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 OR4Q2P0C623 313 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF19P17023 458 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 VEGFCP49767 419 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C18orf21Q32NC0 220 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 UQCC3Q6UW78 93 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 LINGO4Q6UY18 593 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RTL4Q6ZR62 310 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CCDC107Q8WV48 283 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 YIPF5Q969M3 257 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C7orf34Q96L11 122 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CCM2Q9BSQ5 444 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 GALNT9Q9HCQ5 603 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TRIM36Q9NQ86 728 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 DICER1Q9UPY3 1922 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PPK0 400 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 H3BSH0 61 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 THEGLP0DJG4 465 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CELP19835 753 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PRPS1L1P21108 318 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 EDNRAP25101 427 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SUOXP51687 545 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RAB8AP61006 207 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SKP1P63208 163 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TGM3Q08188 693 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PPIGQ13427 754 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 POM121L1PQ3SYA9 428 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TPGS1Q6ZTW0 290 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FAM124AQ86V42 546 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PHYKPLQ8IUZ5 450 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C9orf62Q8N4C0 152 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 DNAJC5GQ8N7S2 189 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF583Q96ND8 569 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C11orf84Q9BUA3 381 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CACNG6Q9BXT2 260 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SMOC2Q9H3U7 446 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 POLR1DQ9Y2S0 133 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CACNG2Q9Y698 323 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PRQ8 180 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HYKKA2RU49 373 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FAM72CH0Y354 149 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CACNG3O60359 315 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PFKLP17858 780 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RBM34P42696 430 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RFX2P48378 723 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 MASP1P48740 699 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TGM4P49221 684 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 RGS8P57771 180 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 VSX2P58304 361 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 DAOAP59103 153 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 MC1RQ01726 317 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ABRAXAS2Q15018 415 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TRAM1Q15629 374 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FAM72AQ5TYM5 149 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FAM72DQ6L9T8 149 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 JAZF1Q86VZ6 243 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FAM72BQ86X60 149 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 MTMR14Q8NCE2 650 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SGCDQ92629 289 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HHIPL1Q96JK4 782 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HDHD5Q9BXW7 423 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ZCCHC2Q9C0B9 1178 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TREX1Q9NSU2 369 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 NOP16Q9Y3C1 178 aaKnown RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TTLL8A6PVC2 850 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 PPEF2O14830 753 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 FABP7O15540 132 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ADAM12O43184 909 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TFP02787 698 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CD1EP15812 388 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 ZXDBP98169 803 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CDK6Q00534 326 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 OR4D1Q15615 310 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TEX30Q5JUR7 227 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TFAP2EQ6VUC0 442 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 Q6ZPB1 254 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 SHFQ7M4L6 423 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 GGHQ92820 318 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 NKD1Q969G9 470 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C3orf30Q96M34 536 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 HSPA12BQ96MM6 686 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 C11orf54Q9H0W9 315 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 OR51J1Q9H342 316 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 CACNG4Q9UBN1 327 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 TMEFF2Q9UIK5 374 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-213ENST00000537002 MAFBQ9Y5Q3 323 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms