RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 LTBQ06643 244 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SETDB1Q15047 1291 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NSUN5P2Q63ZY6 315 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 C18orf63Q68DL7 685 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GRHL2Q6ISB3 625 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 LYPD8Q6UX82 237 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CTAGE3PQ8IX95 158 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 HUS1BQ8NHY5 278 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 C18orf12Q96KH6 178 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MTERF1Q99551 399 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 RBBP8Q99708 897 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TIMP4Q99727 224 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PRDM14Q9GZV8 571 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ACTR8Q9H981 624 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DLL4Q9NR61 685 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TEX10Q9NXF1 929 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 C15orf41Q9Y2V0 281 aa11.89□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NIPBLQ6KC79 2804 aaeCLIP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ACANP16112 2415 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NCKAP5O14513 1909 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FLNAP21333 2647 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CD8B2A6NJW9 211 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GLOD5A6NK44 160 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FAM171A2A8MVW0 826 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PLPP1O14494 284 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CASKO14936 926 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CDH16O75309 829 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TRIM3O75382 744 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PRKRAO75569 313 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PIAS1O75925 651 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 HPNP05981 417 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CYP4B1P13584 511 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 EPORP19235 508 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CTSSP25774 331 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SPRP35270 261 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GP5P40197 560 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PIK3CBP42338 1070 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 AGFG1P52594 562 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZNF136P52737 540 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ARFIP1P53367 373 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 HNRNPH2P55795 449 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FBXW4P57775 412 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DCAF7P61962 342 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CALCOCO2Q13137 446 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OR52E8Q6IFG1 317 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DGAT2L6Q6ZPD8 337 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NUDT13Q86X67 352 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GALNT12Q8IXK2 581 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TEX9Q8N6V9 391 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 WFDC11Q8NEX6 87 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GPR22Q99680 433 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 EPB41L4BQ9H329 900 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 METTL7AQ9H8H3 244 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ZNF395Q9H8N7 513 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NMRAL1Q9HBL8 299 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 RPH3AQ9Y2J0 694 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SLC6A5Q9Y345 797 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PCDHGA11Q9Y5H2 935 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 NPFFR2Q9Y5X5 522 aa11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MAP1AP78559 2803 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 E7ESA3 106 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CCDC188H7C350 402 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GNB5O14775 395 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ARHGEF9O43307 516 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 KERAO60938 352 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 WISP3O95389 354 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ACSL3O95573 720 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 INHBBP09529 407 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FAM58BPP0C7Q3 252 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SLC35E2BP0CK96 405 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SLC35E2P0CK97 266 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TMIGD3P0DMS9 266 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GFAPP14136 432 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PTX3P26022 381 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PIK3R1P27986 724 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GALNSP34059 522 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PAFAH1B1P43034 410 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 RPS13P62277 151 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 PCDH1Q08174 1060 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 POU4F3Q15319 338 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 VASNQ6EMK4 673 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SCIMPQ6UWF3 145 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CLEC9AQ6UXN8 241 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TMEM64Q6YI46 380 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 Q71RC1 249 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 RNF175Q8N4F7 328 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 OR1J4Q8NGS1 313 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 SPPL2AQ8TCT8 520 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 UBTD2Q8WUN7 234 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ABTB1Q969K4 478 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TP53INP1Q96A56 240 aa11.87□□□□□ -0.51
TNFRSF1A-207ENST00000535958 DTNBP1Q96EV8 351 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms