RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	ZNF33B	Q06732	778 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	C16orf87	Q6PH81	154 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	PAPD4	Q6PIY7	484 aa	Known RBP	13.22	□□□□□ -0.29
POLE-208	ENST00000535934	LINC00299	Q6ZSB3	139 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	VN1R5	Q7Z5H4	357 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	TRPV3	Q8NET8	790 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	RP9	Q8TA86	221 aa	Known RBP	13.22	□□□□□ -0.29
POLE-208	ENST00000535934	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.22	□□□□□ -0.29
POLE-208	ENST00000535934	DOK1	Q99704	481 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	TUBA1C	Q9BQE3	449 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	C1orf50	Q9BV19	199 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.22	□□□□□ -0.29
POLE-208	ENST00000535934	CACNA1D	Q01668	2161 aa		13.22	□□□□□ -0.29
POLE-208	ENST00000535934	TRAV17	A0A0B4J275	112 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934		A0A0G2JN53	185 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	BCAS2	O75934	225 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-208	ENST00000535934	EPOR	P19235	508 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	MAOA	P21397	527 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	IL10	P22301	178 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	GGT5	P36269	586 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	AGTR2	P50052	363 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	IDH3A	P50213	366 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	RPS3A	P61247	264 aa	Known RBP	13.21	□□□□□ -0.29
POLE-208	ENST00000535934	RGS1	Q08116	209 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	ACER2	Q5QJU3	275 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	ABHD17B	Q5VST6	288 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	CMC1	Q7Z7K0	106 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	CARM1	Q86X55	608 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	GPSM1	Q86YR5	675 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	CTAGE3P	Q8IX95	158 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	PGAM4	Q8N0Y7	254 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	BEST3	Q8N1M1	668 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	TBC1D19	Q8N5T2	526 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	POU5F2	Q8N7G0	328 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	PPM1N	Q8N819	430 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	PNPT1	Q8TCS8	783 aa	Known RBP	13.21	□□□□□ -0.29
POLE-208	ENST00000535934	CDKL2	Q92772	493 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	RNF32	Q9H0A6	362 aa		13.21	□□□□□ -0.29
POLE-208	ENST00000535934	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	2e-12	■■■□□ 18.6
POLE-208	ENST00000535934	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-208	ENST00000535934	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.21	□□□□□ -0.29
POLE-208	ENST00000535934	CPAMD8	Q8IZJ3	1885 aa		13.21	□□□□□ -0.3
POLE-208	ENST00000535934	ABCA12	Q86UK0	2595 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CLDN1	O95832	211 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	SLC35E2B	P0CK96	405 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	KIT	P10721	976 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	STMN1	P16949	149 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CD22	P20273	847 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ME2	P23368	584 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	COL8A1	P27658	744 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	HSPA7	P48741	367 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TDGF1P3	P51864	188 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	RUNX2	Q13950	521 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	SLBP	Q14493	270 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TOR1AIP1	Q5JTV8	583 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TMIGD1	Q6UXZ0	262 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ABHD13	Q7L211	337 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	AMIGO2	Q86SJ2	522 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	M1AP	Q8TC57	530 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	KIAA1191	Q96A73	305 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ISOC1	Q96CN7	298 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TSPAN17	Q96FV3	270 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	PTCHD1	Q96NR3	888 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ANKRD60	Q9BZ19	345 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	PAIP1	Q9H074	479 aa	Known RBP	13.2	□□□□□ -0.3
POLE-208	ENST00000535934	RHBG	Q9H310	441 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	MMP25	Q9NPA2	562 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	NECTIN3	Q9NQS3	549 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	OLAH	Q9NV23	265 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ANKRD10	Q9NXR5	420 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TXNDC16	Q9P2K2	825 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	MID2	Q9UJV3	735 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	OSGIN2	Q9Y236	505 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	SLC5A6	Q9Y289	635 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	IGKV3D-11	A0A0A0MRZ8	115 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	HMX2	A2RU54	273 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	LRIT2	A6NDA9	550 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	OR5H15	A6NDH6	313 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TRIM64B	A6NI03	449 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TMEM114	B3SHH9	223 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	PRMT3	O60678	531 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	EDN3	P14138	238 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	MST1	P26927	711 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CD96	P40200	585 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	PRKAA2	P54646	552 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	OR4D2	P58180	307 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	SLC26A5	P58743	744 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	RAB10	P61026	200 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	BTN3A2	P78410	334 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	KLF10	Q13118	480 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ELOA	Q14241	798 aa	Known RBP	13.2	□□□□□ -0.3
POLE-208	ENST00000535934	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.2	□□□□□ -0.3
POLE-208	ENST00000535934	IL23R	Q5VWK5	629 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	FAM180A	Q6UWF9	173 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	ISCA2	Q86U28	154 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CA13	Q8N1Q1	262 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CENPS	Q8N2Z9	138 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	BCORP1	Q8N888	145 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	MS4A6E	Q96DS6	147 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	DUS3L	Q96G46	650 aa	Known RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms