RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 M0R3H8 397 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 KIAA0513O60268 411 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 TPST2O60704 377 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 CLEC3AO75596 197 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 PIPP12273 146 aaPredicted RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 CD72P21854 359 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 PPP2R1BP30154 601 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 PTGER1P34995 402 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SLC15A1P46059 708 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SEPHS1P49903 392 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 NCBP2P52298 156 aaKnown RBP eCLIP12.44□□□□□ -0.42
LDLR-203ENST00000535915 PRKAG1P54619 331 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 PRDX1Q06830 199 aaKnown RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 SLC13A2Q13183 592 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 TIMM50Q3ZCQ8 353 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 AGBL4Q5VU57 503 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 AGAP7PQ5VUJ5 663 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 PGBD2Q6P3X8 592 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 OLIG3Q7RTU3 272 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 KRT73Q86Y46 540 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 FAM20CQ8IXL6 584 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SLC7A13Q8TCU3 470 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 AMDHD1Q96NU7 426 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 BBS4Q96RK4 519 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 MACROD1Q9BQ69 325 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SLC25A19Q9HC21 320 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 IGKV1-8A0A0C4DH67 115 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 LRIT2A6NDA9 550 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 ERAL1O75616 437 aaKnown RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 SOX6P35712 828 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 LIMK1P53667 647 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SMIM11AP58511 58 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SNRPGP62308 76 aaKnown RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 KRT33BQ14525 404 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 MLC1Q15049 377 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 IRF4Q15306 451 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 ZNF181Q2M3W8 571 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SLX4IPQ5VYV7 408 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 ZNF793Q6ZN11 406 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 HMGN2P46Q86SG4 172 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 CYP4Z2PQ8N1L4 340 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 OR2A1Q8NGT9 310 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 CREB3L4Q8TEY5 395 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 KLHL6Q8WZ60 621 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 ZNF764Q96H86 408 aaPredicted RBP12.44□□□□□ -0.42
LDLR-203ENST00000535915 CAMK1GQ96NX5 476 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 KLHL31Q9H511 634 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SLC35C2Q9NQQ7 365 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 KCNK6Q9Y257 313 aa12.44□□□□□ -0.42
LDLR-203ENST00000535915 SCN3AQ9NY46 2000 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 ISPDA4D126 451 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 NME6O75414 186 aaPredicted RBP12.43□□□□□ -0.42
LDLR-203ENST00000535915 KAT7O95251 611 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 DNTTP04053 509 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 DRD2P14416 443 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TNNI3P19429 210 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 RAB28P51157 221 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TRA2BP62995 288 aaKnown RBP12.43□□□□□ -0.42
LDLR-203ENST00000535915 ZNF45Q02386 682 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 CST6Q15828 149 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 PSRC1Q6PGN9 363 aaPredicted RBP12.43□□□□□ -0.42
LDLR-203ENST00000535915 ATCAYQ86WG3 371 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 SLC34A3Q8N130 599 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TCEANCQ8N8B7 351 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TP53I13Q8NBR0 393 aaPredicted RBP12.43□□□□□ -0.42
LDLR-203ENST00000535915 YIPF4Q9BSR8 244 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 FAIM2Q9BWQ8 316 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 AICDAQ9GZX7 198 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 MVB12BQ9H7P6 319 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TAS2R7Q9NYW3 318 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 A4GNTQ9UNA3 340 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 ALPPL2P10696 532 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 CKMT1AP12532 417 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 GTF2E2P29084 291 aaKnown RBP12.43□□□□□ -0.42
LDLR-203ENST00000535915 NTSP30990 170 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 CSTF2P33240 577 aaKnown RBP eCLIP12.43□□□□□ -0.42
LDLR-203ENST00000535915 GJA4P35212 333 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 DMPKQ09013 629 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 DOC2BQ14184 412 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 SSX1Q16384 188 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 STEAP3Q658P3 488 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 CACTIN-AS1Q8N1I8 211 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 HDDC3Q8N4P3 179 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TBC1D19Q8N5T2 526 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 PARP16Q8N5Y8 322 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 POC5Q8NA72 575 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 HTRA1Q92743 480 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 TMEM80Q96HE8 168 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 FNDC11Q9BVV2 318 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 FZD3Q9NPG1 666 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 NDOR1Q9UHB4 597 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 MOSPD1Q9UJG1 213 aa12.43□□□□□ -0.42
LDLR-203ENST00000535915 ACAD8Q9UKU7 415 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms