RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PSMA8Q8TAA3 256 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 MRGPRDQ8TDS7 321 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 UBLCP1Q8WVY7 318 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-202ENST00000535689 PRCCQ92733 491 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-202ENST00000535689 PROX1Q92786 737 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 ATP6V1E2Q96A05 226 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 PGLYRP2Q96PD5 576 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 CPNE1Q99829 537 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 THUMPD3Q9BV44 507 aaKnown RBP2.97□□□□□ -1.93
SNHG1-202ENST00000535689 GPR174Q9BXC1 333 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 BARHL1Q9BZE3 327 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 ABCG4Q9H172 646 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 POLR3FQ9H1D9 316 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-202ENST00000535689 ADNPQ9H2P0 1102 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 LRRC4Q9HBW1 653 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 TUFT1Q9NNX1 390 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 TXLNGQ9NUQ3 528 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 LRWD1Q9UFC0 647 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 GIMAP2Q9UG22 337 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 NAP1L2Q9ULW6 460 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-202ENST00000535689 SCML1Q9UN30 329 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 KCNJ14Q9UNX9 436 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 CHKBQ9Y259 395 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 ITM2BQ9Y287 266 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 LIPGQ9Y5X9 500 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 SVILO95425 2214 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 CENPEQ02224 2701 aa2.97□□□□□ -1.93
SNHG1-202ENST00000535689 CELSR3Q9NYQ7 3312 aa2.96□□□□□ -1.93
SNHG1-202ENST00000535689 RP1L1Q8IWN7 2480 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ITPR2Q14571 2701 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ABCA12Q86UK0 2595 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 MED13Q9UHV7 2174 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 IGHV4-61A0A0C4DH41 118 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 FAM149AA5PLN7 773 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ARHGEF35A5YM69 484 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 TMEM150BA6NC51 233 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 DUXAA6NLW8 204 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 PMS2P5A8MQ11 134 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 H0YAE9 185 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 TRIM77I1YAP6 450 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CPLX1O14810 134 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 B4GALT5O43286 388 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 GLRA3O75311 464 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 TOM1L1O75674 476 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 SLU7O95391 586 aaKnown RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 PRAMEF12O95522 483 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CLPTM1O96005 669 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 PENKP01210 267 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 IGHV4-59P01825 116 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 UMODP07911 640 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 HMBSP08397 361 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 OR52Z1P0C646 297 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 FAM157CP0CG43 387 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 SPP1P10451 314 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ALPPL2P10696 532 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 PDGFRAP16234 1089 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CYP11B2P19099 503 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ACP1P24666 158 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ANXA13P27216 316 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CHRNB4P30926 498 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CEACAM8P31997 349 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CTNNA1P35221 906 aaKnown RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 NUDT1P36639 197 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 MAGEA11P43364 429 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CSNK1EP49674 416 aaKnown RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 MAT1AQ00266 395 aaKnown RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CDR2Q01850 454 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ARL16Q0P5N6 197 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 OVGP1Q12889 678 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ITGA9Q13797 1035 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 VEZF1Q14119 521 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ZC2HC1CQ53FD0 456 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 KLHL22Q53GT1 634 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 WDR38Q5JTN6 314 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 GLRA4Q5JXX5 417 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 STXBP5Q5T5C0 1151 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 WLSQ5T9L3 541 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 HES3Q5TGS1 186 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 OR4A47Q6IF82 309 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CASC4Q6P4E1 433 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CD300LGQ6UXG3 332 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 RAD9BQ6WBX8 426 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 RBMS3Q6XE24 437 aaKnown RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 MACC1Q6ZN28 852 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 GALNTL5Q7Z4T8 443 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ARHGAP22Q7Z5H3 698 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ABI3BPQ7Z7G0 1075 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 TRPT1Q86TN4 253 aaKnown RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 ZNF595Q8IYB9 648 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 SLC34A3Q8N130 599 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 TMEM86AQ8N2M4 240 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 PRSS35Q8N3Z0 413 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 OR13J1Q8NGT2 312 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 METTL21AQ8WXB1 218 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 TSACCQ96A04 125 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-202ENST00000535689 MAGED4Q96JG8 741 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 SENP8Q96LD8 212 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 CCDC114Q96M63 670 aa2.96□□□□□ -1.94
SNHG1-202ENST00000535689 MUS81Q96NY9 551 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms