RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 EPB42P16452 691 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 GMPRP36959 345 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 DLG1Q12959 904 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 NSUN5P2Q63ZY6 315 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 VASNQ6EMK4 673 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 KIF18BQ86Y91 864 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 TP53INP1Q96A56 240 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 HSPBAP1Q96EW2 488 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 RILPQ96NA2 401 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 MTERF1Q99551 399 aaKnown RBP12.72□□□□□ -0.37
CCDC84-208ENST00000534656 ANGPTL4Q9BY76 406 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 EPB41L4BQ9H329 900 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 UBQLN3Q9H347 655 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 NMRAL1Q9HBL8 299 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 LYARQ9NX58 379 aaKnown RBP12.72□□□□□ -0.37
CCDC84-208ENST00000534656 PCDHGA11Q9Y5H2 935 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 NPFFR2Q9Y5X5 522 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 VPS13CQ709C8 3753 aa12.72□□□□□ -0.37
CCDC84-208ENST00000534656 HRNRQ86YZ3 2850 aaPredicted RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 A0A0A6YYD5 115 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 A0A1W2PR48 441 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 TCRBV9S1A1TA0A576 114 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 CD8B2A6NJW9 211 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 GLOD5A6NK44 160 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 UBXN8O00124 270 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 KERAO60938 352 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 EEDO75530 441 aaKnown RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SNX4O95219 450 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 ATE1O95260 518 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 FAM58BPP0C7Q3 252 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SLC35E2BP0CK96 405 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SLC35E2P0CK97 266 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 PTX3P26022 381 aaPredicted RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SPRP35270 261 aaPredicted RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 BSGP35613 385 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 CDK9P50750 372 aaKnown RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 FBXW4P57775 412 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 RPS13P62277 151 aaKnown RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 DEFB113Q30KQ7 82 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 GRTP1Q5TC63 336 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 FNDC7Q5VTL7 733 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 LIPJQ5W064 366 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 FBXW10Q5XX13 1052 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 BICRALQ6AI39 1079 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 TEX9Q8N6V9 391 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SPPL2AQ8TCT8 520 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 GNRHR2Q96P88 292 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 ZNF717Q9BY31 904 aaPredicted RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 DDX31Q9H8H2 851 aaKnown RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 WDR41Q9HAD4 459 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SAYSD1Q9NPB0 183 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SNX15Q9NRS6 342 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 CAMK2AQ9UQM7 478 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.37
CCDC84-208ENST00000534656 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.37
CCDC84-208ENST00000534656 MBD3L4A6NDZ8 208 aaPredicted RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 MBD3L3A6NE82 208 aaPredicted RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 MBD3L5A6NJ08 208 aaPredicted RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 EIF3HO15372 352 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 TMPRSS11DO60235 418 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 GOSR1O95249 250 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 LTA4HP09960 611 aaKnown RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 NR2F6P10588 404 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 MTHFD2P13995 350 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 DRD2P14416 443 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 BMP7P18075 431 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CTSSP25774 331 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 SSTR4P31391 388 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CASP3P42574 277 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 TMED10P49755 219 aaKnown RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 PHEXP78562 749 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 SORDQ00796 357 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CUL3Q13618 768 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 KEAP1Q14145 624 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 HLA-DQA1Q5Y7H0 255 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CYP20A1Q6UW02 462 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 C3orf62Q6ZUJ4 267 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CMC1Q7Z7K0 106 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 TBC1D1Q86TI0 1168 aaPredicted RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 MYLK4Q86YV6 388 aaPredicted RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 MBD3L2Q8NHZ7 208 aaPredicted RBP12.7□□□□□ -0.38
CCDC84-208ENST00000534656 LINC01560Q8TB33 94 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 UCN3Q969E3 161 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 NTNG2Q96CW9 530 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 WDYHV1Q96HA8 205 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 TRIB1Q96RU8 372 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 UGT2B28Q9BY64 529 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 PLEKHF2Q9H8W4 249 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CALHM2Q9HA72 323 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 CXorf21Q9HAI6 301 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 PSD3Q9NYI0 1048 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 JKAMPQ9P055 326 aa12.7□□□□□ -0.38
CCDC84-208ENST00000534656 C15orf41Q9Y2V0 281 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms