RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PORP16435 677 aaPredicted RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 PCSK2P16519 638 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 CSNK2A2P19784 350 aaPredicted RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 MLF1P58340 268 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 MGAT2Q10469 447 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 PLEKHN1Q494U1 663 aaPredicted RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 IL23RQ5VWK5 629 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 RPS19BP1Q86WX3 136 aaKnown RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 TRIM42Q8IWZ5 723 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 CCDC116Q8IYX3 515 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 LRRC25Q8N386 305 aaPredicted RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 KRTCAP2Q8N6L1 136 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 RAB3IL1Q8TBN0 382 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 KAT2AQ92830 837 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 PELOQ9BRX2 385 aaKnown RBP13.02□□□□□ -0.33
VPS11-205ENST00000534551 MEAF6Q9HAF1 191 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 SLC35C2Q9NQQ7 365 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 COPS7AQ9UBW8 275 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 PCDHGB7Q9Y5F8 929 aa13.02□□□□□ -0.33
VPS11-205ENST00000534551 KLF11O14901 512 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ITGA10O75578 1167 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 OR2J2O76002 312 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ATP1B1P05026 303 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ALDOCP09972 364 aaKnown RBP13.01□□□□□ -0.33
VPS11-205ENST00000534551 G6PDP11413 515 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 DIO3P55073 304 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 SLC37A1P57057 533 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 AP2B1P63010 937 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 RNF4P78317 190 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 TUBA3CQ13748 450 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 NNATQ16517 81 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 MEP1AQ16819 746 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 SLC9B1Q4ZJI4 515 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ZNF628Q5EBL2 1059 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 TUBA3EQ6PEY2 450 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 IGFL3Q6UXB1 125 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 RNF111Q6ZNA4 994 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 Q6ZS92 163 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 IKBIPQ70UQ0 350 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ZADH2Q8N4Q0 377 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 OR7A2PQ8NGA2 310 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 METTL2AQ96IZ6 378 aaKnown RBP13.01□□□□□ -0.33
VPS11-205ENST00000534551 MARK4Q96L34 752 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ZNF354BQ96LW1 612 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 LMF1Q96S06 567 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 STMN3Q9NZ72 180 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 TMED5Q9Y3A6 229 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ZNF780BQ9Y6R6 833 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
VPS11-205ENST00000534551 ZNF462Q96JM2 2506 aa13□□□□□ -0.33
VPS11-205ENST00000534551 DYTNA2CJ06 578 aa13□□□□□ -0.33
VPS11-205ENST00000534551 OR5H15A6NDH6 313 aa13□□□□□ -0.33
VPS11-205ENST00000534551 B8ZZF3 427 aa13□□□□□ -0.33
VPS11-205ENST00000534551 C9JVG2 144 aa13□□□□□ -0.33
VPS11-205ENST00000534551 ZNF195O14628 629 aa13□□□□□ -0.33
VPS11-205ENST00000534551 SCAMP2O15127 329 aaKnown RBP13□□□□□ -0.33
VPS11-205ENST00000534551 HDAC3O15379 428 aa13□□□□□ -0.33
VPS11-205ENST00000534551 SLC28A2O43868 658 aa13□□□□□ -0.33
VPS11-205ENST00000534551 ZFAND5O76080 213 aa13□□□□□ -0.33
VPS11-205ENST00000534551 CBX7O95931 251 aa13□□□□□ -0.33
VPS11-205ENST00000534551 S1PR1P21453 382 aa13□□□□□ -0.33
VPS11-205ENST00000534551 EPHA3P29320 983 aa13□□□□□ -0.33
VPS11-205ENST00000534551 MC3RP41968 323 aa13□□□□□ -0.33
VPS11-205ENST00000534551 GSTM5P46439 218 aa13□□□□□ -0.33
VPS11-205ENST00000534551 TNFSF10P50591 281 aa13□□□□□ -0.33
VPS11-205ENST00000534551 NCBP2P52298 156 aaKnown RBP eCLIP13□□□□□ -0.33
VPS11-205ENST00000534551 MLLT10P55197 1068 aa13□□□□□ -0.33
VPS11-205ENST00000534551 PMP22Q01453 160 aa13□□□□□ -0.33
VPS11-205ENST00000534551 PDE7AQ13946 482 aa13□□□□□ -0.33
VPS11-205ENST00000534551 EBPQ15125 230 aaKnown RBP13□□□□□ -0.33
VPS11-205ENST00000534551 CEBPEQ15744 281 aa13□□□□□ -0.33
VPS11-205ENST00000534551 TRMT12Q53H54 448 aaKnown RBP13□□□□□ -0.33
VPS11-205ENST00000534551 TMEM107Q6UX40 140 aa13□□□□□ -0.33
VPS11-205ENST00000534551 HSDL2Q6YN16 418 aa13□□□□□ -0.33
VPS11-205ENST00000534551 ZNF551Q7Z340 670 aaPredicted RBP13□□□□□ -0.33
VPS11-205ENST00000534551 ZNF227Q86WZ6 799 aa13□□□□□ -0.33
VPS11-205ENST00000534551 ZNF615Q8N8J6 731 aa13□□□□□ -0.33
VPS11-205ENST00000534551 OR7G2Q8NG99 324 aa13□□□□□ -0.33
VPS11-205ENST00000534551 OR52R1Q8NGF1 315 aa13□□□□□ -0.33
VPS11-205ENST00000534551 CKAP2Q8WWK9 683 aa13□□□□□ -0.33
VPS11-205ENST00000534551 TM9SF4Q92544 642 aa13□□□□□ -0.33
VPS11-205ENST00000534551 PNPLA2Q96AD5 504 aa13□□□□□ -0.33
VPS11-205ENST00000534551 PPCDCQ96CD2 204 aa13□□□□□ -0.33
VPS11-205ENST00000534551 THOC1Q96FV9 657 aaKnown RBP13□□□□□ -0.33
VPS11-205ENST00000534551 OR52B2Q96RD2 323 aa13□□□□□ -0.33
VPS11-205ENST00000534551 BBS4Q96RK4 519 aa13□□□□□ -0.33
VPS11-205ENST00000534551 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13□□□□□ -0.33
VPS11-205ENST00000534551 GLIPR2Q9H4G4 154 aa13□□□□□ -0.33
VPS11-205ENST00000534551 REEP4Q9H6H4 257 aa13□□□□□ -0.33
VPS11-205ENST00000534551 KLHL1Q9NR64 748 aa13□□□□□ -0.33
VPS11-205ENST00000534551 GIMAP4Q9NUV9 329 aa13□□□□□ -0.33
VPS11-205ENST00000534551 EHD3Q9NZN3 535 aa13□□□□□ -0.33
VPS11-205ENST00000534551 TEKT2Q9UIF3 430 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms