RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 hCG_2039718K7EN88 272 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 TP73O15350 636 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 RFPL1O75677 317 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 C1SP09871 688 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 IL1RNP18510 177 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 XRCC1P18887 633 aaPredicted RBP10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 AGTR2P50052 363 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 RORCP51449 518 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 HK3P52790 923 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 MVKQ03426 396 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 BTBD16Q32M84 506 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 TPRG1LQ5T0D9 272 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.74□□□□□ -0.691e-8■■□□□ 12.2
AMBRA1-211ENST00000533727 BTN2A1Q7KYR7 527 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF420Q8TAQ5 688 aaPredicted RBP10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 PCDHB16Q9NRJ7 776 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 RDH8Q9NYR8 311 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 RPL36Q9Y3U8 105 aaKnown RBP10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 A0A1B0GVT2 93 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 VSTM2BA6NLU5 285 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 ARG2P78540 354 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 MAB21L1Q13394 359 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 YOD1Q5VVQ6 348 aaPredicted RBP10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 ASCC1Q8N9N2 400 aaKnown RBP10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 OR10G2Q8NGC3 310 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 CD200R1Q8TD46 325 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 DIO2Q92813 273 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 BCL2L14Q9BZR8 327 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 PCDHAC1Q9H158 963 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 C1orf21Q9H246 121 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 GPN2Q9H9Y4 310 aaPredicted RBP10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 TMEM9BQ9NQ34 198 aa10.74□□□□□ -0.69
AMBRA1-211ENST00000533727 ZCWPW2A0A1B0GU75 182 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC9B1P1A6NJY1 282 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 CDC123O75794 336 aaPredicted RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 DBIP07108 87 aaKnown RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 NCK1P16333 377 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 MAOBP27338 520 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 DCAF7P61962 342 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 PSPHP78330 225 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 TIGD6Q17RP2 521 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC36A3Q495N2 470 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 UNC50Q53HI1 259 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 HMBOX1Q6NT76 420 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SYVN1Q86TM6 617 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC44A3Q8N4M1 653 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 OR8J3Q8NGG0 315 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SNIP1Q8TAD8 396 aaKnown RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 CLCC1Q96S66 551 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 UPB1Q9UBR1 384 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 EFCAB7A8K855 629 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 BOLA2-SMG1P6H3BVE0 249 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SLITRK5O94991 958 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 IFNA6P05013 189 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SMSP52788 366 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 INHBCP55103 352 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 TAS2R38P59533 333 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 RAB6CQ53S08 254 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 TMEM225Q6GV28 225 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 OPN5Q6U736 354 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 PAMR1Q6UXH9 720 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SLITRK4Q8IW52 837 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 PDLIM5Q96HC4 596 aaKnown RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 MAPKAP1Q9BPZ7 522 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 RAB6CQ9H0N0 254 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 OAZ3Q9UMX2 235 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 HSPB11Q9Y547 144 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 LAMA4Q16363 1823 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 OR52A4PA6NMU1 304 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 ACOX3O15254 700 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 CDC40O60508 579 aaKnown RBP eCLIP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 AK4P27144 223 aaPredicted RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 HSD11B1P28845 292 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 ARHGDIBP52566 201 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 DGKQP52824 942 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SFT2D3Q587I9 215 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 METTL25Q8N6Q8 603 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 PROKR2Q8NFJ6 384 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 OR8K5Q8NH50 307 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 ASB12Q8WXK4 309 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 IP6K3Q96PC2 410 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 MCHR1Q99705 422 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 METTL21EPA6NDL7 271 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 GLOD5A6NK44 160 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 H7C2Y5 167 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 PDCD5O14737 125 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF28P17035 718 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 CLDN8P56748 225 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 UFM1P61960 85 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 LSAMPQ13449 338 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 TLR1Q15399 786 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 FAM69BQ5VUD6 431 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 LARP4Q71RC2 724 aaKnown RBP eCLIP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 TP53INP2Q8IXH6 220 aa10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 HDAC2Q92769 488 aaKnown RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 GTPBP3Q969Y2 492 aaKnown RBP10.73□□□□□ -0.69
AMBRA1-211ENST00000533727 FUBP1Q96AE4 644 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms