RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 FGD2Q7Z6J4 655 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 GPR180Q86V85 440 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 RPS19BP1Q86WX3 136 aaKnown RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 NUDCD3Q8IVD9 361 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 ZNF595Q8IYB9 648 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 CPSF7Q8N684 471 aaKnown RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 ZNF454Q8N9F8 522 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 TMEM52Q8NDY8 209 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 MYRIPQ8NFW9 859 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 CDC26Q8NHZ8 85 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 AGR3Q8TD06 166 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 MGARPQ8TDB4 240 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 ELP5Q8TE02 316 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 PKNOX2Q96KN3 472 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 KCNK17Q96T54 332 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 TRIM45Q9H8W5 580 aaPredicted RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 WDR41Q9HAD4 459 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 LYRM4Q9HD34 91 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 NECTIN3Q9NQS3 549 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 LYARQ9NX58 379 aaKnown RBP8.1□□□□□ -1.11
COPB1-210ENST00000533533 COQ3Q9NZJ6 369 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 TSC22D4Q9Y3Q8 395 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 MMACHCQ9Y4U1 282 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 TLN2Q9Y4G6 2542 aa8.1□□□□□ -1.11
COPB1-210ENST00000533533 FREM3P0C091 2139 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 GLOD5A6NK44 160 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 CYR61O00622 381 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 TYROBPO43914 113 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 PRKRAO75569 313 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 MYO1DO94832 1006 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 SEMA3DO95025 777 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 CHEK2O96017 543 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 BPGMP07738 259 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 FAM58BPP0C7Q3 252 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 CD1EP15812 388 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 CHN1P15882 459 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 IGFBP2P18065 325 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 TPP2P29144 1249 aaPredicted RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 PPP2R1BP30154 601 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 PTGER1P34995 402 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 BSGP35613 385 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 MAPK12P53778 367 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 FOXA1P55317 472 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 HNRNPH2P55795 449 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 HSD17B7P56937 341 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 CSTF3Q12996 717 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 HHATQ5VTY9 493 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 C18orf63Q68DL7 685 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 CLEC6AQ6EIG7 209 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 ZNF227Q86WZ6 799 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 OR4N5Q8IXE1 308 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 ZCCHC7Q8N3Z6 543 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 KIF2BQ8N4N8 673 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 C1orf52Q8N6N3 182 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 GOLGA6L1Q8N7Z2 621 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 POGLUT1Q8NBL1 392 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 TMEM125Q96AQ2 219 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 PGM2Q96G03 612 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 ALOXE3Q9BYJ1 711 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 RPF2Q9H7B2 306 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 BRF2Q9HAW0 419 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 EML4Q9HC35 981 aaKnown RBP8.09□□□□□ -1.11
COPB1-210ENST00000533533 MS4A12Q9NXJ0 267 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 PSD3Q9NYI0 1048 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 KCMF1Q9P0J7 381 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 VPS29Q9UBQ0 182 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 ATG4BQ9Y4P1 393 aa8.09□□□□□ -1.11
COPB1-210ENST00000533533 HRNRQ86YZ3 2850 aaPredicted RBP8.08□□□□□ -1.12
COPB1-210ENST00000533533 NSD1Q96L73 2696 aaPredicted RBP8.08□□□□□ -1.12
COPB1-210ENST00000533533 NINQ8N4C6 2090 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 A0A0A6YYD5 115 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 A0A1B0GTH9 108 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 GNG14A0A1W2PPG7 69 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 TCRBV16S1A1N1A0A5B0 115 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 H3BQF6 201 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 TFECO14948 347 aaPredicted RBP8.08□□□□□ -1.12
COPB1-210ENST00000533533 AZIN1O14977 448 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 TM9SF1O15321 606 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 TMPRSS11DO60235 418 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 OR10H2O60403 315 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 NPHS1O60500 1241 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 CTNSO60931 367 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 GUCY1B2O75343 617 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 SCELO95171 688 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 ZWINTO95229 277 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 HSPA4LO95757 839 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 TPOP07202 933 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 CHRNGP07510 517 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 NR2F6P10588 404 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 UROSP10746 265 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 HSD3B1P14060 373 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 HSD3B2P26439 372 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
COPB1-210ENST00000533533 PTGS2P35354 604 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 SERPINB4P48594 390 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 ALDH9A1P49189 494 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 HLCSP50747 726 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 ARFIP1P53367 373 aa8.08□□□□□ -1.12
COPB1-210ENST00000533533 MLF1P58340 268 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms