RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ACSL6Q9UKU0 697 aa14.11□□□□□ -0.15
PCDHA9-202ENST00000532602 OR2AT4A6NND4 320 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 TMEM189-UBE2V1I3L0A0 370 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 HOXB9P17482 250 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 HSD11B2P80365 405 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ADAM15Q13444 863 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 FAM78AQ5JUQ0 283 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 OR8H1Q8NGG4 311 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 PGAP3Q96FM1 320 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 DPH2Q9BQC3 489 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 CPEB1Q9BZB8 566 aaKnown RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 C5AR2Q9P296 337 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 CCL26Q9Y258 94 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 DISC1C4P0D8 188 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 FLRT2O43155 660 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 GPR39O43194 453 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 RAD51DO75771 328 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF35P13682 527 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 DOHHQ9BU89 302 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 APOOQ9BUR5 198 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 PELI2Q9HAT8 420 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ABCD2Q9UBJ2 740 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 EIF3KQ9UBQ5 218 aaKnown RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF451Q9Y4E5 1061 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 FCER2P06734 321 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ENTPD1P49961 510 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 SHC2P98077 582 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF33BQ06732 778 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 DLX2Q07687 328 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ST3GAL4Q11206 333 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 RCAN2Q14206 197 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 CDK10Q15131 360 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 FIGNL1Q6PIW4 674 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 GPR137CQ8N3F9 429 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ACVR1CQ8NER5 493 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 SGTBQ96EQ0 304 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 MACROD1Q9BQ69 325 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 SCP2D1Q9UJQ7 156 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 UNC119BA6NIH7 251 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 MRPL3P09001 348 aaKnown RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 IL4RP24394 825 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 CST5P28325 142 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 SIX1Q15475 284 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 TRAM1Q15629 374 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 C3orf33Q6P1S2 294 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ASB15Q8WXK1 588 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 EHD1Q9H4M9 534 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 SAGE1Q9NXZ1 904 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 POLR1CO15160 346 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 ERCC1P07992 297 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 HOXC13P31276 330 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 CES4AQ5XG92 561 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 LIX1LQ8IVB5 337 aa14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 CBARPQ8N350 705 aaPredicted RBP14.1□□□□□ -0.15
PCDHA9-202ENST00000532602 MYH14Q7Z406 1995 aaKnown RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 VAMP1P23763 118 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 MAOBP27338 520 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 NANOGP8Q6NSW7 305 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 C6orf120Q7Z4R8 191 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 NANOGQ9H9S0 305 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 TRNAU1APQ9NX07 287 aaKnown RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 TYROBPO43914 113 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 UBE2NP61088 152 aaKnown RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 ECH1Q13011 328 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 MFSD13AQ14CX5 517 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 MPP7Q5T2T1 576 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 UBQLNLQ8IYU4 475 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 PIP5K1AQ99755 562 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 DPAGT1Q9H3H5 408 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 KCNK12Q9HB15 430 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SRPK3Q9UPE1 567 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 KANTRA0A1W2PQU2 76 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 ANXA3P12429 323 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SIM1P81133 766 aaPredicted RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 PTPRRQ15256 657 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 WSCD2Q2TBF2 565 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 ZBED5Q49AG3 693 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 LYSMD4Q5XG99 296 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 KLHDC8AQ8IYD2 350 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 MINDY2Q8NBR6 621 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 THAP4Q8WY91 577 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 NKX1-2Q9UD57 310 aaPredicted RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 PHIPQ8WWQ0 1821 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SMIM30A4D0T7 59 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 AK4P27144 223 aaPredicted RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 GGT2P36268 569 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC9A3P48764 834 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SGSHP51688 502 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 LRIT3Q3SXY7 679 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SHISA6Q6ZSJ9 500 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 SPERTQ8NA61 448 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 AIFM2Q9BRQ8 373 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 ZBTB20Q9HC78 741 aaPredicted RBP14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 MAST2Q6P0Q8 1798 aa14.09□□□□□ -0.15
PCDHA9-202ENST00000532602 A8MVJ9 347 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 POU4F2Q12837 409 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 MLC1Q15049 377 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 LARP4Q71RC2 724 aaKnown RBP eCLIP14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 ARHGAP12Q8IWW6 846 aa14.08□□□□□ -0.15
PCDHA9-202ENST00000532602 ARFGAP1Q8N6T3 406 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms