RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 FAM189A2Q15884 450 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 C1orf94Q6P1W5 598 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ARHGAP12Q8IWW6 846 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 OR4C15Q8NGM1 316 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 THEM6Q8WUY1 208 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 AURKBQ96GD4 344 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ARRDC1-AS1Q9H2J1 176 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 YBX2Q9Y2T7 364 aaKnown RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 PLD2O14939 933 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ARL6IP5O75915 188 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF888P0CJ79 500 aaPredicted RBP10.76□□□□□ -0.69
PTPRK-221ENST00000532331 OR12D1P0DN82 309 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ABOP16442 354 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 HK1P19367 917 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 GSTM2P28161 218 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 UNC50Q53HI1 259 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 PGBD2Q6P3X8 592 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 Q7L0L9 218 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 DOK4Q8TEW6 326 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 NSUN5Q96P11 429 aaKnown RBP10.76□□□□□ -0.69
PTPRK-221ENST00000532331 TWSG1Q9GZX9 223 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 TBC1D24Q9ULP9 559 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 J3QLW9 94 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ABCB7O75027 752 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 RDH16O75452 317 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ERCC1P07992 297 aaPredicted RBP10.76□□□□□ -0.69
PTPRK-221ENST00000532331 SLC35E2BP0CK96 405 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF19P17023 458 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 HMGA1P17096 107 aaKnown RBP10.76□□□□□ -0.69
PTPRK-221ENST00000532331 CBLP22681 906 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 RPE65Q16518 533 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 PPP1R3AQ16821 1122 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 TCTN2Q96GX1 697 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 RDH14Q9HBH5 336 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 LTB4R2Q9NPC1 389 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 MKS1Q9NXB0 559 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 SH3BGRL2Q9UJC5 107 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 KCND3Q9UK17 655 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 PCDHGB2Q9Y5G2 931 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 A0A1W2PPL8 197 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 SGK494L7N484 410 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 TOR1BO14657 336 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 FAM189A1O60320 539 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ECHS1P30084 290 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ARHGAP19Q14CB8 494 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 UNQ6126/PRO20091Q6UXV3 157 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ARMC10Q8N2F6 343 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 SLC44A3Q8N4M1 653 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF778Q96MU6 729 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ORAI3Q9BRQ5 295 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 EDEM2Q9BV94 578 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 STOML2Q9UJZ1 356 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 C2orf92A0A1B0GVN3 265 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF432O94892 652 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 C1SP09871 688 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 CD46P15529 392 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 XCR1P46094 333 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 CTSCP53634 463 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 NANOGP8Q6NSW7 305 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 TMEM17Q86X19 198 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 SLITRK4Q8IW52 837 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 C15orf40Q8WUR7 153 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 LINC01599Q8WXQ3 324 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 NANOGQ9H9S0 305 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 TRNAU1APQ9NX07 287 aaKnown RBP10.76□□□□□ -0.69
PTPRK-221ENST00000532331 MUTYHQ9UIF7 546 aa10.76□□□□□ -0.69
PTPRK-221ENST00000532331 PRAMEF33A0A0G2JMD5 474 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 C17orf105B2RV13 164 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 TEX46H3BTG2 121 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 SDHDO14521 159 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 PRAMEF10O60809 474 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 ICAM2P13598 275 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 PGAM2P15259 253 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 HK3P52790 923 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 NUDT6P53370 316 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 FADDQ13158 208 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 CBLBQ13191 982 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 C1orf53Q5VUE5 145 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 KIAA1614Q5VZ46 1190 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 MEAF6Q9HAF1 191 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 PCDHB14Q9Y5E9 798 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 MYH9P35579 1960 aaKnown RBP10.75□□□□□ -0.69
PTPRK-221ENST00000532331 SOX14O95416 240 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 HLA-DPB1P04440 258 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 SDHBP21912 280 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 SGSHP51688 502 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 ABCA11PQ4W5N1 156 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 LRIF1Q5T3J3 769 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF440Q8IYI8 595 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 FAM86B1Q8N7N1 296 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 OR13H1Q8NG92 308 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 CPNE2Q96FN4 548 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-221ENST00000532331 RADILQ96JH8 1075 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 OR6C1Q96RD1 312 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 TM9SF2Q99805 663 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 ZDHHC5Q9C0B5 715 aa10.75□□□□□ -0.69
PTPRK-221ENST00000532331 HOXD1Q9GZZ0 328 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms