RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FRG2Q64ET8 278 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 CDH24Q86UP0 819 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 TAGAPQ8N103 731 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 LRRC25Q8N386 305 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF441Q8N8Z8 693 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 FRG2BQ96QU4 278 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 CDC42EP4Q9H3Q1 356 aaKnown RBP15.48■□□□□ 0.07
CPSF1-207ENST00000531727 CXorf21Q9HAI6 301 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 TEX10Q9NXF1 929 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-207ENST00000531727 QPCTLQ9NXS2 382 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 MTRF1LQ9UGC7 380 aaKnown RBP15.48■□□□□ 0.07
CPSF1-207ENST00000531727 PCTPQ9UKL6 214 aa15.48■□□□□ 0.07
CPSF1-207ENST00000531727 CNOT11Q9UKZ1 510 aaKnown RBP15.48■□□□□ 0.07
CPSF1-207ENST00000531727 DNAJC13O75165 2243 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 A0A0G2JNJ9 132 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 C2orf92A0A1B0GVN3 265 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 A0A1W2PS29 197 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 STX16-NPEPL1H3BU86 382 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 STX16O14662 325 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 SMIM24O75264 130 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 HOXD4P09016 255 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-207ENST00000531727 PIK3R1P27986 724 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 SSTR4P31391 388 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 ZFP36L2P47974 494 aaKnown RBP15.47■□□□□ 0.07
CPSF1-207ENST00000531727 TRAF3Q13114 568 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 TSNAXIP1Q2TAA8 658 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 C10orf62Q5T681 223 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-207ENST00000531727 C1orf185Q5T7R7 199 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 TTC19Q6DKK2 380 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-207ENST00000531727 TP53INP1Q96A56 240 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 NSUN5Q96P11 429 aaKnown RBP15.47■□□□□ 0.07
CPSF1-207ENST00000531727 DOHHQ9BU89 302 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 TSPYL1Q9H0U9 437 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 ZBTB26Q9HCK0 441 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 ACKR4Q9NPB9 350 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 XPR1Q9UBH6 696 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 Q9UFV3 132 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 ADAM29Q9UKF5 820 aa15.47■□□□□ 0.07
CPSF1-207ENST00000531727 ANKRD33BA6NCL7 494 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 CAPN14A8MX76 684 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 LRATO95237 230 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 ACSL3O95573 720 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 COL6A2P12110 1019 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 GABRA1P14867 456 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 SERPINB9P50453 376 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 FUT7Q11130 342 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 IFT88Q13099 833 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 TBCELQ5QJ74 424 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 TAOK1Q7L7X3 1001 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 PAGE2Q7Z2X7 111 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 GALNT12Q8IXK2 581 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 CLYBLQ8N0X4 340 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 OR4K14Q8NGD5 310 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 ZNF597Q96LX8 424 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 JSRP1Q96MG2 331 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-207ENST00000531727 MRPL1Q9BYD6 325 aaKnown RBP15.46■□□□□ 0.07
CPSF1-207ENST00000531727 SLC6A15Q9H2J7 730 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 AHSPQ9NZD4 102 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 B4GALT7Q9UBV7 327 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 PCDHGB3Q9Y5G1 929 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 IKBKGQ9Y6K9 419 aa15.46■□□□□ 0.07
CPSF1-207ENST00000531727 CELSR1Q9NYQ6 3014 aa15.46■□□□□ 0.06
CPSF1-207ENST00000531727 FAM47E-STBD1D6RA91 191 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 TP53I11O14683 189 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 TRIM3O75382 744 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-207ENST00000531727 URI1O94763 535 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-207ENST00000531727 KLK1P06870 262 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 CT62P0C5K7 136 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 ADH7P40394 386 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 RPS6KA2Q15349 733 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 WHAMMP3Q1A5X7 153 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 GGTA1PQ4G0N0 100 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 CCNYL2Q5T2Q4 361 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 HLA-DQA1Q5Y7H0 255 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 TMEM198Q66K66 360 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 LIX1LQ8IVB5 337 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 ZNF615Q8N8J6 731 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 OR4F6Q8NGB9 312 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 NEIL3Q8TAT5 605 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 DIO2Q92813 273 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 PAFAH2Q99487 392 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 FMO2Q99518 471 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 ZNF559Q9BR84 538 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 OR10A5Q9H207 317 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 SLC24A3Q9HC58 644 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 ALKBH4Q9NXW9 302 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 KCNN3Q9UGI6 736 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 NPFFR2Q9Y5X5 522 aa15.45■□□□□ 0.06
CPSF1-207ENST00000531727 ARHGAP21Q5T5U3 1957 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 KRT38O76015 456 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 RPS17P08708 135 aaKnown RBP15.44■□□□□ 0.06
CPSF1-207ENST00000531727 CNTFP26441 200 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 GDF1P27539 372 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 TRPC1P48995 793 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 TMED10P49755 219 aaKnown RBP15.44■□□□□ 0.06
CPSF1-207ENST00000531727 XKP51811 444 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 FBXW4P57775 412 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 TESK1Q15569 626 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 SLC25A35Q3KQZ1 300 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 RIPPLY2Q5TAB7 128 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms