RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CASC3O15234 703 aaKnown RBP16.26■□□□□ 0.19
BRCA2-204ENST00000530893 RHAGQ02094 409 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 RELAQ04206 551 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 HYAL2Q12891 473 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 PGBD2Q6P3X8 592 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 CASP12Q6UXS9 341 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 OR56A1Q8NGH5 318 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 OR8J1Q8NGP2 316 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 VANGL1Q8TAA9 524 aaPredicted RBP16.26■□□□□ 0.19
BRCA2-204ENST00000530893 LMAN2LQ9H0V9 348 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 POLR2J3Q9H1A7 115 aaKnown RBP16.26■□□□□ 0.19
BRCA2-204ENST00000530893 XKR8Q9H6D3 395 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 TRPC4Q9UBN4 977 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 A4GNTQ9UNA3 340 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 ASB4Q9Y574 426 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 SNX11Q9Y5W9 270 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 A0A0G2JPF8 293 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 PRAMEF27A3QJZ7 478 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 ISPDA4D126 451 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 HNRNPCL2B2RXH8 293 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 HNRNPCL3B7ZW38 293 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 PLRG1O43660 514 aaKnown RBP16.26■□□□□ 0.19
BRCA2-204ENST00000530893 HNRNPCL4P0DMR1 293 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 TNFRSF4P43489 277 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 XKP51811 444 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 SLAMF1Q13291 335 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 RNLSQ5VYX0 342 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 LACC1Q8IV20 430 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 ACOT4Q8N9L9 421 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 OR2L3Q8NG85 312 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 OR4D11Q8NGI4 311 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 SUN3Q8TAQ9 357 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 SLC7A13Q8TCU3 470 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 NR4A3Q92570 626 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 MGLLQ99685 303 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 SLC17A9Q9BYT1 436 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 PRDM7Q9NQW5 492 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 SLC6A14Q9UN76 642 aa16.26■□□□□ 0.19
BRCA2-204ENST00000530893 CHD9Q3L8U1 2897 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 FAM227AF5H4B4 570 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 M0R129 80 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 CCRL2O00421 344 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 ERI3O43414 337 aaKnown RBP16.25■□□□□ 0.19
BRCA2-204ENST00000530893 FHP07954 510 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 ATP5A1P25705 553 aaKnown RBP16.25■□□□□ 0.19
BRCA2-204ENST00000530893 TGFBR1P36897 503 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 NCF4Q15080 339 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 LEXMQ3ZCV2 418 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 KIAA1211LQ6NV74 962 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 SZRD1Q7Z422 152 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 NLGN4XQ8N0W4 816 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 OR5D16Q8NGK9 328 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 KLHL6Q8WZ60 621 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 SCARF2Q96GP6 870 aaPredicted RBP16.25■□□□□ 0.19
BRCA2-204ENST00000530893 PLA2G2FQ9BZM2 168 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 KLHL31Q9H511 634 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 KIR3DX1Q9H7L2 352 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 SLC6A20Q9NP91 592 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 MKLN1Q9UL63 735 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 ENTPD4Q9Y227 616 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 RPL36Q9Y3U8 105 aaKnown RBP16.25■□□□□ 0.19
BRCA2-204ENST00000530893 NINQ8N4C6 2090 aa16.25■□□□□ 0.19
BRCA2-204ENST00000530893 A0A0G2JN53 185 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 A0A1W2PQU0 124 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 AGAP5A6NIR3 686 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 PDZK1P1A8MUH7 402 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 H3BN98 237 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 PPM1DO15297 605 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 LGI1O95970 557 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 CD72P21854 359 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 CMPK1P30085 196 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 CSTF2P33240 577 aaKnown RBP eCLIP16.24■□□□□ 0.19
BRCA2-204ENST00000530893 PRR5P85299 388 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 IFITM3Q01628 133 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 ZNF45Q02386 682 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 TARDBPQ13148 414 aaKnown RBP eCLIP16.24■□□□□ 0.19
BRCA2-204ENST00000530893 MED22Q15528 200 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 OCLNQ16625 522 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 SLC25A30Q5SVS4 291 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 PPP2R2DQ66LE6 453 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 RBM45Q8IUH3 476 aaKnown RBP16.24■□□□□ 0.19
BRCA2-204ENST00000530893 UCN3Q969E3 161 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 ELSPBP1Q96BH3 223 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 PRRC1Q96M27 445 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 APOOQ9BUR5 198 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 FNDC11Q9BVV2 318 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 FBRSQ9HAH7 460 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 C11orf16Q9NQ32 467 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 FBXL12Q9NXK8 326 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 UGT2A1Q9Y4X1 527 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 COLEC10Q9Y6Z7 277 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 GRXCR1A8MXD5 290 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 HAT1O14929 419 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 ENTPD6O75354 484 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 NME6O75414 186 aaPredicted RBP16.24■□□□□ 0.19
BRCA2-204ENST00000530893 TGM1P22735 817 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 S100A5P33763 92 aa16.24■□□□□ 0.19
BRCA2-204ENST00000530893 STXBP1P61764 594 aaKnown RBP16.24■□□□□ 0.19
BRCA2-204ENST00000530893 TGM3Q08188 693 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms