RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CLDN8P56748 225 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 KIAA1024LP59773 190 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ACTR1AP61163 376 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PTGR1Q14914 329 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ATPAF2Q8N5M1 289 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 L3MBTL4Q8NA19 623 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 GPR26Q8NDV2 337 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 OR5M3Q8NGP4 307 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 COQ8AQ8NI60 647 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 OR2A7Q96R45 310 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 NIT2Q9NQR4 276 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 LATS2Q9NRM7 1088 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 UFSP2Q9NUQ7 469 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 FBXW11Q9UKB1 542 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 MYO16Q9Y6X6 1858 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 TP53BP1Q12888 1972 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 OR2M5A3KFT3 312 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 MATN3O15232 486 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 LANCL1O43813 399 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 GADD45GO95257 159 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 NFATC1O95644 943 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 GJB1P08034 283 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 POU3F2P20265 443 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 FNTBP49356 437 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 RAP2BP61225 183 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 RBBP4Q09028 425 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ILKQ13418 452 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PRAMEF19Q5SWL8 479 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 RAET1GQ6H3X3 334 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 HAGHLQ6PII5 290 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SVBPQ8N300 66 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 KCTD12Q96CX2 325 aaKnown RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 TCEAL4Q96EI5 215 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SYT17Q9BSW7 474 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 INPP5KQ9BT40 448 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 DOHHQ9BU89 302 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 FSD1LQ9BXM9 530 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 HDHD2Q9H0R4 259 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ALX4Q9H161 411 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 CDCP1Q9H5V8 836 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 METTL17Q9H7H0 456 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 MRPS18AQ9NVS2 196 aaKnown RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 RLIMQ9NVW2 624 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 NDUFAF4Q9P032 175 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 MARCH4Q9P2E8 410 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PCDHB7Q9Y5E2 793 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM129A0AVI4 362 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 TEX46H3BTG2 121 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 PHYHO14832 338 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SUSD5O60279 629 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ENTPD6O75354 484 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 BEST1O76090 585 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 MMP2P08253 660 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ACPPP15309 386 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 HPGDP15428 266 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 GPX4P36969 197 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 AGTR2P50052 363 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 CRISP1P54107 249 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 MAZP56270 477 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 STARD6P59095 220 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 OSTNP61366 133 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ERVK-25P63136 954 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 DEFA5Q01523 94 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 KCNAB1Q14722 419 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 PTPRCAPQ14761 206 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 GRIN2CQ14957 1233 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ABRAXAS2Q15018 415 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 IL31Q6EBC2 164 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 LAPTM4BQ86VI4 370 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 LGI4Q8N135 537 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SLC43A2Q8N370 569 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 RYBPQ8N488 228 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 KLHL36Q8N4N3 616 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 NKAPQ8N5F7 415 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ARIH2OSQ8N7S6 290 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 METTL6Q8TCB7 284 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SELENOMQ8WWX9 145 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ELMOD3Q96FG2 381 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 GMLQ99445 158 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 DDOQ99489 341 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 CHST8Q9H2A9 424 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 FNDC3AQ9Y2H6 1198 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 DNMT3AQ9Y6K1 912 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 USP34Q70CQ2 3546 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 M0QYT0 321 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 OR7A17O14581 309 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 MAFKO60675 156 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 NBNO60934 754 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 C1QCP02747 245 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 C1SP09871 688 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ELK1P19419 428 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 HOXC13P31276 330 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 ACTR1BP42025 376 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 AVPR1BP47901 424 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 KCNJ3P48549 501 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 PGDP52209 483 aa7.72□□□□□ -1.17
CSDE1-214ENST00000530886 RPL38P63173 70 aaKnown RBP7.72□□□□□ -1.17
CSDE1-214ENST00000530886 SLC14A1Q13336 389 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms