RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 MUS81Q96NY9 551 aa14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 ZNF300Q96RE9 604 aaPredicted RBP14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 EPYCQ99645 322 aa14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 TREX2Q9BQ50 279 aaPredicted RBP14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 YIPF4Q9BSR8 244 aa14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 C3orf14Q9HBI5 128 aa14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 C3orf18Q9UK00 162 aa14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 SH3GLB1Q9Y371 365 aa14.53□□□□□ -0.08
CCDC90B-213ENST00000529611 MUC3AQ02505 3323 aa14.52□□□□□ -0.08
CCDC90B-213ENST00000529611 SCN2AQ99250 2005 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 A0A1B0GVT2 93 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 TMEM247A6NEH6 219 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 CYR61O00622 381 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 PDE9AO76083 593 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 SEC24DO94855 1032 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 PDGFBP01127 241 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 DAPP51397 102 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 GFERP55789 205 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 FUT5Q11128 374 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 RNF220Q5VTB9 566 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 CWF19L1Q69YN2 538 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 USP53Q70EK8 1073 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 CA13Q8N1Q1 262 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 METTL25Q8N6Q8 603 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 TMEM52Q8NDY8 209 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 NUP43Q8NFH3 380 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 C16orf58Q96GQ5 468 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 TCTN2Q96GX1 697 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 ZNF347Q96SE7 839 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 MRPS26Q9BYN8 205 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 PDP1Q9P0J1 537 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 PCDHGB3Q9Y5G1 929 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 LYVE1Q9Y5Y7 322 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 CACNA1EQ15878 2313 aa14.52□□□□□ -0.09
CCDC90B-213ENST00000529611 SPTBP11277 2137 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 SGK494L7N484 410 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ADAMDEC1O15204 470 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 CLPTM1O96005 669 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 TFAP2AP05549 437 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 NR2F1P10589 423 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 CPMP14384 443 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 IGFBP5P24593 272 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 HOXA6P31267 233 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ANXA11P50995 505 aaKnown RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 SHC2P98077 582 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 PUM1Q14671 1186 aaKnown RBP eCLIP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 PRTGQ2VWP7 1150 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 RFX4Q33E94 735 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 FOXB2Q5VYV0 432 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 TTC23Q5W5X9 447 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 KDM4DQ6B0I6 523 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 TTC33Q6PID6 262 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 APLFQ8IW19 511 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ZNF786Q8N393 782 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 GPR32P1Q8NGA4 272 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 COL26A1Q96A83 441 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 GIMAP5Q96F15 307 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 CLK4Q9HAZ1 481 aaKnown RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 NTMQ9P121 344 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 THEGQ9P2T0 379 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 TESMINQ9Y4I5 508 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 PCDH15Q96QU1 1955 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 CCDC163A0A0D9SF12 145 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 SRPX2O60687 465 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 MITFO75030 526 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 FESP07332 822 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ATP6V1B1P15313 513 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ITGA2P17301 1181 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 PPP2R1BP30154 601 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 XCR1P46094 333 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 YAP1P46937 504 aaKnown RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 FNTBP49356 437 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 RAD23AP54725 363 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 BNIP3Q12983 259 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 FAM111BQ6SJ93 734 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 LGI4Q8N135 537 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 OR7G2Q8NG99 324 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 COL21A1Q96P44 957 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 TGM7Q96PF1 710 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ZNF607Q96SK3 696 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 NPLQ9BXD5 320 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 EQTNQ9NQ60 294 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 ORC6Q9Y5N6 252 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 GPC6Q9Y625 555 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 RNF215Q9Y6U7 377 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 SPACA6W5XKT8 324 aa14.51□□□□□ -0.09
CCDC90B-213ENST00000529611 NINQ8N4C6 2090 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 TLCD2A6NGC4 264 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 RHPN2P1A8MT19 583 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 J3KTA2 159 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 FGF17O60258 216 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 LDB3O75112 727 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 RDH16O75452 317 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 DNAJB5O75953 348 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 CHRM4P08173 479 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 SOX18P35713 384 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 CTSKP43235 329 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 GABRA4P48169 554 aa14.5□□□□□ -0.09
CCDC90B-213ENST00000529611 PPM1FP49593 454 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms