RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 KCNC2Q96PR1 638 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 KRT12Q99456 494 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 TBCDQ9BTW9 1192 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 CAPS2Q9BXY5 557 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 SNX15Q9NRS6 342 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 TEX10Q9NXF1 929 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 LAMP3Q9UQV4 416 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 WIF1Q9Y5W5 379 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 USF3Q68DE3 2245 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
AMBRA1-207ENST00000529553 NCKAP5O14513 1909 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SDR42E2A6NKP2 422 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 HRKO00198 91 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 PLOD2O00469 737 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 CBR3O75828 277 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SIX3O95343 332 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GUCA1CO95843 209 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 CGAP01215 116 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 RHOXF2BP0C7M4 288 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 MLNP12872 115 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 TBXA2RP21731 343 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 CCKARP32238 428 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GALNSP34059 522 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 KCNJ5P48544 419 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 HNMTP50135 292 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GFRA1P56159 465 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SLC37A1P57057 533 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 FBXW4P57775 412 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 PLIN5Q00G26 463 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GPS1Q13098 491 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 TBX2Q13207 712 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SNTA1Q13424 505 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SNX1Q13596 522 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 BCL2A1Q16548 175 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 CCNG2Q16589 344 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SPRED3Q2MJR0 410 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 BICRALQ6AI39 1079 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 DRICH1Q6PGQ1 229 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 C22orf34Q6ZV56 151 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 ZNF550Q7Z398 422 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GRAMD2AQ8IUY3 354 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 ST13P4Q8IZP2 240 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GTPBP3Q969Y2 492 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 PPWD1Q96BP3 646 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 ZC3HAV1LQ96H79 300 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 HES6Q96HZ4 224 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 GAL3ST4Q96RP7 486 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 NDNQ99608 321 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 MAPKAP1Q9BPZ7 522 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 PELOQ9BRX2 385 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 SLCO5A1Q9H2Y9 848 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 C20orf96Q9NUD7 363 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 MS4A12Q9NXJ0 267 aa10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 PACSIN2Q9UNF0 486 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-207ENST00000529553 C2orf92A0A1B0GVN3 265 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 EMC8O43402 210 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 FGF17O60258 216 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 TGM6O95932 706 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 F7P08709 466 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ALOX15P16050 662 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 NAGAP17050 411 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ATP5A1P25705 553 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ACVR1BP36896 505 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 KIR2DL2P43627 348 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 LHX2P50458 406 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 NRG3P56975 720 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 CDKL1Q00532 357 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ID2Q02363 134 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 SETDB1Q15047 1291 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 SLC30A6Q6NXT4 461 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 VWA1Q6PCB0 445 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 AAGABQ6PD74 315 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 DGAT2L6Q6ZPD8 337 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 CNEP1R1Q8N9A8 125 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ACOT4Q8N9L9 421 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ZNF669Q96BR6 464 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 FAM167BQ9BTA0 163 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 OR2B2Q9GZK3 357 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 SHARPINQ9H0F6 387 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 OPN3Q9H1Y3 402 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 EHD1Q9H4M9 534 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 ACTR8Q9H981 624 aa10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 BARX1Q9HBU1 254 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 EXO1Q9UQ84 846 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 MRPS18CQ9Y3D5 142 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 EPN1Q9Y6I3 576 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-207ENST00000529553 NINQ8N4C6 2090 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 TCRBV7S3A2A0A539 114 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 GNB5O14775 395 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 SCELO95171 688 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 PLAUP00749 431 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 THBDP07204 575 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 CPN2P22792 545 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 MAGEA6P43360 314 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 CDKN2DP55273 166 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 HERVK_113P63132 956 aa10.51□□□□□ -0.73
AMBRA1-207ENST00000529553 ERVK-8P63133 956 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms