RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 EFCAB11Q9BUY7 163 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 UGT2B28Q9BY64 529 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 PHACTR1Q9C0D0 580 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 WWTR1Q9GZV5 400 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 PIGMQ9H3S5 423 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 EHD1Q9H4M9 534 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 CNOT10Q9H9A5 744 aaKnown RBP8.22□□□□□ -1.09
VPS11-203ENST00000529545 UBTD1Q9HAC8 227 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 SNX15Q9NRS6 342 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 DNAJC11Q9NVH1 559 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 MS4A12Q9NXJ0 267 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ZNF226Q9NYT6 803 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 CTNNAL1Q9UBT7 734 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 IKZF3Q9UKT9 509 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 C15orf41Q9Y2V0 281 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 OARD1Q9Y530 152 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 IKBKGQ9Y6K9 419 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 KIAA1549Q9HCM3 1950 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 ARID1AO14497 2285 aa8.22□□□□□ -1.09
VPS11-203ENST00000529545 C2orf92A0A1B0GVN3 265 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 OR6C76A6NM76 312 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 RNF212BA8MTL3 300 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 FGF17O60258 216 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 CDH16O75309 829 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ALOX15P16050 662 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 ZNF37AP17032 561 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 HIST1H1TP22492 207 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 ATP5A1P25705 553 aaKnown RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 SSR2P43308 183 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 SLC6A12P48065 614 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 PGGT1BP53609 377 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 NRG3P56975 720 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 HERVK_113P63132 956 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ERVK-8P63133 956 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 GAB1Q13480 694 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ZNF267Q14586 743 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 TMEM35AQ53FP2 167 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ENPP6Q6UWR7 440 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 C20orf204Q6ZNR8 217 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 TMEM139Q8IV31 216 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ST13P4Q8IZP2 240 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
VPS11-203ENST00000529545 TCAIMQ8N3R3 496 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ZNF441Q8N8Z8 693 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 NAT8LQ8N9F0 302 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 C9orf106Q8NAJ2 232 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 BBOF1Q8ND07 529 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 RIT1Q92963 219 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 UBE2E3Q969T4 207 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 RHBDF1Q96CC6 855 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 VPS39Q96JC1 886 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 RILPQ96NA2 401 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 GNRHR2Q96P88 292 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 CENPKQ9BS16 269 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ERVK-6Q9BXR3 956 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 RBSNQ9H1K0 784 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 RPF2Q9H7B2 306 aaKnown RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 TEX10Q9NXF1 929 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 WWOXQ9NZC7 414 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 C6orf203Q9P0P8 240 aaPredicted RBP8.21□□□□□ -1.1
VPS11-203ENST00000529545 PHF11Q9UIL8 331 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ADAM21Q9UKJ8 722 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 ERVK-19Q9WJR5 959 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 TLN2Q9Y4G6 2542 aa8.21□□□□□ -1.1
VPS11-203ENST00000529545 NCF1BA6NI72 391 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 NCF1CA8MVU1 366 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 H0Y3Z8 333 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 HRKO00198 91 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 RTCAO00442 366 aaKnown RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 CTIFO43310 598 aaKnown RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 CRLF1O75462 422 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 RCBTB2O95199 551 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 CNOT4O95628 575 aaKnown RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 TBX6O95947 436 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 IFNA2P01563 188 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 NCF1P14598 390 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 KRT15P19012 456 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 CXCR5P32302 372 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 CPOXP36551 454 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 BUD31P41223 144 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 FBXW4P57775 412 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 IRF8Q02556 426 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 FOXF2Q12947 444 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 DOC2AQ14183 400 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 EBPQ15125 230 aaKnown RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 TSNQ15631 228 aaKnown RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 C18orf21Q32NC0 220 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 EIPR1Q53HC9 387 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 WIPI1Q5MNZ9 446 aaPredicted RBP8.2□□□□□ -1.1
VPS11-203ENST00000529545 TEDDM1Q5T9Z0 273 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 TTC27Q6P3X3 843 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 ZNF793Q6ZN11 406 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 VN1R5Q7Z5H4 357 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 OR1J4Q8NGS1 313 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 SPPL2AQ8TCT8 520 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 TP53INP1Q96A56 240 aa8.2□□□□□ -1.1
VPS11-203ENST00000529545 INTS12Q96CB8 462 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms