RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ADAMTSL2Q86TH1 951 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF441Q8N8Z8 693 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 INTS12Q96CB8 462 aaKnown RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 PERPQ96FX8 193 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 TMEM41AQ96HV5 264 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 VPS39Q96JC1 886 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 WFIKKN1Q96NZ8 548 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 CCL19Q99731 98 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 TUBA1CQ9BQE3 449 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 PELOQ9BRX2 385 aaKnown RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 EFCAB11Q9BUY7 163 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ERVK-6Q9BXR3 956 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 MS4A8Q9BY19 250 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ACBD3Q9H3P7 528 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 SNX15Q9NRS6 342 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 DNAJC11Q9NVH1 559 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF226Q9NYT6 803 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 WWOXQ9NZC7 414 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 C6orf203Q9P0P8 240 aaPredicted RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ERVK-19Q9WJR5 959 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 HEATR5AQ86XA9 2040 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 C2orf92A0A1B0GVN3 265 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 RTCAO00442 366 aaKnown RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 MSTNO14793 375 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CDH16O75309 829 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 PAX1P15863 534 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CD22P20273 847 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CRYGSP22914 178 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CHMP24386 653 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TLX1P31314 330 aaPredicted RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CXCR5P32302 372 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 FBXW4P57775 412 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 SLAMF1Q13291 335 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 E2F2Q14209 437 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TOMM20Q15388 145 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TGFBIQ15582 683 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TSNQ15631 228 aaKnown RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TBCCQ15814 346 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 PAGE2BQ5JRK9 111 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CDKL4Q5MAI5 379 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 OR4C11Q6IEV9 310 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TMEM64Q6YI46 380 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 FRA10AC1Q70Z53 315 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 IGDCC3Q8IVU1 814 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 TCAIMQ8N3R3 496 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 FAM83FQ8NEG4 500 aaPredicted RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 ZNF473Q8WTR7 871 aaKnown RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 RIT1Q92963 219 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 KRT12Q99456 494 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 PHACTR1Q9C0D0 580 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 CNOT10Q9H9A5 744 aaKnown RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 PLAC1Q9HBJ0 212 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 PPANQ9NQ55 473 aaKnown RBP11.2□□□□□ -0.62
SRPRA-202ENST00000527817 SLC17A6Q9P2U8 582 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 ABCA1O95477 2261 aa11.2□□□□□ -0.62
SRPRA-202ENST00000527817 RNF212BA8MTL3 300 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 STK16O75716 305 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 GPR75O95800 540 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 TGFB1P01137 390 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 CLPSP04118 112 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 PTPN6P29350 595 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 GCKP35557 465 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 PTH2RP49190 550 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 TMED10P49755 219 aaKnown RBP11.19□□□□□ -0.62
SRPRA-202ENST00000527817 FAM27E3Q08E93 113 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 CYP1B1Q16678 543 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 DEPDC1Q5TB30 811 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 RNASEH2BQ5TBB1 312 aaKnown RBP11.19□□□□□ -0.62
SRPRA-202ENST00000527817 TMEM81Q6P7N7 255 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 CCDC137Q6PK04 289 aaKnown RBP11.19□□□□□ -0.62
SRPRA-202ENST00000527817 YRDCQ86U90 279 aaKnown RBP11.19□□□□□ -0.62
SRPRA-202ENST00000527817 GPR180Q86V85 440 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 OR1J4Q8NGS1 313 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 DOK4Q8TEW6 326 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 ANKRD49Q8WVL7 239 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 UBE2E3Q969T4 207 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 PIK3IP1Q96FE7 263 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 CMTM7Q96FZ5 175 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 TEX10Q9NXF1 929 aaPredicted RBP11.19□□□□□ -0.62
SRPRA-202ENST00000527817 PHF11Q9UIL8 331 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 PACSIN3Q9UKS6 424 aa11.19□□□□□ -0.62
SRPRA-202ENST00000527817 CUBNO60494 3623 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 NCF1BA6NI72 391 aaPredicted RBP11.18□□□□□ -0.62
SRPRA-202ENST00000527817 NCF1CA8MVU1 366 aaPredicted RBP11.18□□□□□ -0.62
SRPRA-202ENST00000527817 GNB5O14775 395 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 OR10H2O60403 315 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 BANF1O75531 89 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 TNFSF13O75888 250 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 CRHP06850 196 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 SLC35E2BP0CK96 405 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 SLC35E2P0CK97 266 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 NCF1P14598 390 aaPredicted RBP11.18□□□□□ -0.62
SRPRA-202ENST00000527817 SSR2P43308 183 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 NRG3P56975 720 aa11.18□□□□□ -0.62
SRPRA-202ENST00000527817 TAS2R39P59534 338 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms