RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 BGNP21810 368 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 SLC1A6P48664 564 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 STX3Q13277 289 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF321PQ8N8H1 164 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 CATSPER1Q8NEC5 780 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 MGARPQ8TDB4 240 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 THAP3Q8WTV1 239 aaPredicted RBP16.12■□□□□ 0.17
LTBP3-208ENST00000527339 KLHL29Q96CT2 875 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 ATP6V1G3Q96LB4 118 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 UTP23Q9BRU9 249 aaKnown RBP16.12■□□□□ 0.17
LTBP3-208ENST00000527339 CNPPD1Q9BV87 410 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 MYNNQ9NPC7 610 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 PFDN4Q9NQP4 134 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.12■□□□□ 0.17
LTBP3-208ENST00000527339 EHD3Q9NZN3 535 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.12■□□□□ 0.17
LTBP3-208ENST00000527339 TMED5Q9Y3A6 229 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 RAP2CQ9Y3L5 183 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 PCDHGA10Q9Y5H3 936 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF780BQ9Y6R6 833 aa16.12■□□□□ 0.17
LTBP3-208ENST00000527339 A0A1W2PS29 197 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 PRKNO60260 465 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-208ENST00000527339 F10P00742 488 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 CSNK2A2P19784 350 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-208ENST00000527339 ERVK-8P63133 956 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 RNF4P78317 190 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 TUBA3CQ13748 450 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF267Q14586 743 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-208ENST00000527339 XKR7Q5GH72 579 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 C6orf163Q5TEZ5 329 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 RPUSD3Q6P087 351 aaKnown RBP16.11■□□□□ 0.17
LTBP3-208ENST00000527339 TUBA3EQ6PEY2 450 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 IKBIPQ70UQ0 350 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 GALNT12Q8IXK2 581 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 SAMD14Q8IZD0 417 aaPredicted RBP16.11■□□□□ 0.17
LTBP3-208ENST00000527339 GOLGA6L1Q8N7Z2 621 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF781Q8N8C0 355 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 OR5L2Q8NGL0 311 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 SUN3Q8TAQ9 357 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.11■□□□□ 0.17
LTBP3-208ENST00000527339 FCRL1Q96LA6 429 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 SH3GL2Q99962 352 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 CXorf21Q9HAI6 301 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 UTS2RQ9UKP6 389 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 ERVK-19Q9WJR5 959 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 POLEQ07864 2286 aa16.11■□□□□ 0.17
LTBP3-208ENST00000527339 WIPF3A6NGB9 483 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 HRKO00198 91 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 SKAP2O75563 359 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ITGA10O75578 1167 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ATP1B1P05026 303 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 DDCP20711 480 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 TRHRP34981 398 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 FEN1P39748 380 aaKnown RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 CD96P40200 585 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 RPL38P63173 70 aaKnown RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 C2orf80Q0P641 193 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 BST1Q10588 318 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF750Q32MQ0 723 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 FAM71E1Q6IPT2 247 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 LRRC25Q8N386 305 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 HORMAD2Q8N7B1 307 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 CDC26Q8NHZ8 85 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 RAB3IL1Q8TBN0 382 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 CNRIP1Q96F85 164 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 PPP3R2Q96LZ3 170 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF681Q96N22 645 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 SORT1Q99523 831 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 C20orf27Q9GZN8 174 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ZNF395Q9H8N7 513 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 TRIM45Q9H8W5 580 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 MYOTQ9UBF9 498 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ERRFI1Q9UJM3 462 aaPredicted RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 HAO1Q9UJM8 370 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 YARS2Q9Y2Z4 477 aaKnown RBP16.1■□□□□ 0.17
LTBP3-208ENST00000527339 PCDHGB6Q9Y5F9 930 aa16.1■□□□□ 0.17
LTBP3-208ENST00000527339 ANKRD17O75179 2603 aaKnown RBP16.09■□□□□ 0.17
LTBP3-208ENST00000527339 TMEM200CA6NKL6 621 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 OR6C76A6NM76 312 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 PRAMEF2O60811 474 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 NT5EP21589 574 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 DCTP40126 519 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 CYB561P49447 251 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 RPL14P50914 215 aaKnown RBP16.09■□□□□ 0.17
LTBP3-208ENST00000527339 HK2P52789 917 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 OC90Q02509 493 aaPredicted RBP16.09■□□□□ 0.17
LTBP3-208ENST00000527339 FUT7Q11130 342 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 OR1C1Q15619 314 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 INAQ16352 499 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 GALNTL6Q49A17 601 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 RFTN2Q52LD8 501 aaPredicted RBP16.09■□□□□ 0.17
LTBP3-208ENST00000527339 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 RNF111Q6ZNA4 994 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 TRIM42Q8IWZ5 723 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 C9orf40Q8IXQ3 194 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 MDS2Q8NDY4 140 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 NUBPLQ8TB37 319 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 PRR7Q8TB68 274 aa16.09■□□□□ 0.17
LTBP3-208ENST00000527339 EXOSC8Q96B26 276 aaKnown RBP16.09■□□□□ 0.17
LTBP3-208ENST00000527339 SIGLEC12Q96PQ1 595 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms