RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TCRBV9S1A1TA0A576 114 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 ANKRD33BA6NCL7 494 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 TP53I11O14683 189 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 EEDO75530 441 aaKnown RBP21.94■■□□□ 1.1
USP47-205ENST00000525257 ACSL3O95573 720 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 RAF1P04049 648 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 NR2F6P10588 404 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 DRD2P14416 443 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 EPB42P16452 691 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 PIK3CBP42338 1070 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 RPS13P62277 151 aaKnown RBP21.94■■□□□ 1.1
USP47-205ENST00000525257 MRPS25P82663 173 aaKnown RBP21.94■■□□□ 1.1
USP47-205ENST00000525257 PCDH1Q08174 1060 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 CBLBQ13191 982 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 DAZAP2Q15038 168 aaPredicted RBP21.94■■□□□ 1.1
USP47-205ENST00000525257 RAPH1Q70E73 1250 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 CAMKMTQ7Z624 323 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 CMC1Q7Z7K0 106 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 TEX9Q8N6V9 391 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 ZNF441Q8N8Z8 693 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 RILPQ96NA2 401 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 ATOH8Q96SQ7 321 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 PRDM14Q9GZV8 571 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 EPB41L4BQ9H329 900 aa21.94■■□□□ 1.1
USP47-205ENST00000525257 A0A1W2PR48 441 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 TUBAL3A6NHL2 446 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 FAM159BA6NKW6 160 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 TMPRSS11DO60235 418 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 KERAO60938 352 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 FOSL1P15407 271 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 SSTR4P31391 388 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 MASP1P48740 699 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 CDK9P50750 372 aaKnown RBP21.93■■□□□ 1.1
USP47-205ENST00000525257 AGFG1P52594 562 aaKnown RBP21.93■■□□□ 1.1
USP47-205ENST00000525257 SLMAPQ14BN4 828 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 CTAGE3PQ8IX95 158 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 PM20D2Q8IYS1 436 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 UCN3Q969E3 161 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 TRIB1Q96RU8 372 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 ZNF717Q9BY31 904 aaPredicted RBP21.93■■□□□ 1.1
USP47-205ENST00000525257 NMRAL1Q9HBL8 299 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 LYARQ9NX58 379 aaKnown RBP21.93■■□□□ 1.1
USP47-205ENST00000525257 ASB4Q9Y574 426 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 ANGPTL3Q9Y5C1 460 aa21.93■■□□□ 1.1
USP47-205ENST00000525257 A0A0A6YYD5 115 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 A0A1W2PS29 197 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 CAPN14A8MX76 684 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 CCDC188H7C350 402 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 FAM155BO75949 473 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 ATE1O95260 518 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 AIFM1O95831 613 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 HPNP05981 417 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 SLC35E2BP0CK96 405 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 SPRP35270 261 aaPredicted RBP21.92■■□□□ 1.1
USP47-205ENST00000525257 KEAP1Q14145 624 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 TOMM20Q15388 145 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 NSUN5P2Q63ZY6 315 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 MRM1Q6IN84 353 aaKnown RBP21.92■■□□□ 1.1
USP47-205ENST00000525257 CYP20A1Q6UW02 462 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 TBC1D1Q86TI0 1168 aaPredicted RBP21.92■■□□□ 1.1
USP47-205ENST00000525257 LINC01560Q8TB33 94 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 SPPL2AQ8TCT8 520 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 GNRHR2Q96P88 292 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 UBQLN3Q9H347 655 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 SNX15Q9NRS6 342 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 RYDENQ9NUL5 291 aaKnown RBP21.92■■□□□ 1.1
USP47-205ENST00000525257 TEX10Q9NXF1 929 aaPredicted RBP21.92■■□□□ 1.1
USP47-205ENST00000525257 C15orf41Q9Y2V0 281 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 NPFFR2Q9Y5X5 522 aa21.92■■□□□ 1.1
USP47-205ENST00000525257 EXPH5Q8NEV8 1989 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 EEF1E1-BLOC1S5C9J1V9 151 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 EEF1E1O43324 174 aaKnown RBP21.91■■□□□ 1.1
USP47-205ENST00000525257 FAM58BPP0C7Q3 252 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 SLC35E2P0CK97 266 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 EPXP11678 715 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 PTX3P26022 381 aaPredicted RBP21.91■■□□□ 1.1
USP47-205ENST00000525257 BSGP35613 385 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 DEFB113Q30KQ7 82 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 EIPR1Q53HC9 387 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 DCST1Q5T197 706 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 FNDC7Q5VTL7 733 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 HLA-DQA1Q5Y7H0 255 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 VASNQ6EMK4 673 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 PACS2Q86VP3 889 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 KIF18BQ86Y91 864 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 PRR22Q8IZ63 422 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 WFDC11Q8NEX6 87 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 UGT2B28Q9BY64 529 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 ANGPTL4Q9BY76 406 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 DPH5Q9H2P9 285 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 ACTR8Q9H981 624 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 WDR41Q9HAD4 459 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 PCDHGA11Q9Y5H2 935 aa21.91■■□□□ 1.1
USP47-205ENST00000525257 SNX4O95219 450 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 GBAP04062 536 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 LTA4HP09960 611 aaKnown RBP21.9■■□□□ 1.1
USP47-205ENST00000525257 GALNSP34059 522 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 ARFIP1P53367 373 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 PHEXP78562 749 aa21.9■■□□□ 1.1
USP47-205ENST00000525257 SF3B4Q15427 424 aaKnown RBP eCLIP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms