RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SPACA9Q96E40 222 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-203ENST00000525013 VPS29Q9UBQ0 182 aa17.13■□□□□ 0.33
CAPN1-203ENST00000525013 DCDC2Q9UHG0 476 aa17.13■□□□□ 0.33
CAPN1-203ENST00000525013 C2orf92A0A1B0GVN3 265 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 A0A1W2PPM1 405 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 OR6C76A6NM76 312 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 FOXO6A8MYZ6 492 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 E9PLN8 166 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 ULK1O75385 1050 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 CPMP14384 443 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 PORP16435 677 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-203ENST00000525013 NT5EP21589 574 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 PIGAP37287 484 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 SLCO1A2P46721 670 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 NR0B1P51843 470 aaKnown RBP17.12■□□□□ 0.33
CAPN1-203ENST00000525013 PRKAA2P54646 552 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
CAPN1-203ENST00000525013 EBPQ15125 230 aaKnown RBP17.12■□□□□ 0.33
CAPN1-203ENST00000525013 TAGAPQ8N103 731 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 MMP21Q8N119 569 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 CNPY4Q8N129 248 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 CCNYL1Q8N7R7 359 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 OR5M3Q8NGP4 307 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 VKORC1Q9BQB6 163 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 IL1RL2Q9HB29 575 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 TUBA8Q9NY65 449 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-203ENST00000525013 PCDHA9Q9Y5H5 950 aa17.12■□□□□ 0.33
CAPN1-203ENST00000525013 MYO9AB2RTY4 2548 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 C1orf226A1L170 272 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 ERAL1O75616 437 aaKnown RBP17.11■□□□□ 0.33
CAPN1-203ENST00000525013 GLSO94925 669 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-203ENST00000525013 CLPSP04118 112 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 SHBGP04278 402 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 FBXO45P0C2W1 286 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 HSD3B1P14060 373 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 AGAP20933 346 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 HSD3B2P26439 372 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 SERPINB3P29508 390 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 MAGEA5P43359 124 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 ALDH9A1P49189 494 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 KCNJ2P63252 427 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 LCP2Q13094 533 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 ZNF630Q2M218 657 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-203ENST00000525013 PRAMEF20Q5VT98 475 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 LYPD8Q6UX82 237 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 TMEM64Q6YI46 380 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 TMEM251Q8N6I4 163 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 EIF1ADQ8N9N8 165 aaKnown RBP17.11■□□□□ 0.33
CAPN1-203ENST00000525013 OR10G3Q8NGC4 313 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 TM4SF18Q96CE8 201 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 L3HYPDHQ96EM0 354 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 RUBCNLQ9H714 662 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 ZDHHC11Q9H8X9 412 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 CHST11Q9NPF2 352 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 PLSCR2Q9NRY7 297 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 PSME2Q9UL46 239 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 STK38LQ9Y2H1 464 aa17.11■□□□□ 0.33
CAPN1-203ENST00000525013 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.11■□□□□ 0.33
CAPN1-203ENST00000525013 PHF3Q92576 2039 aaKnown RBP17.11■□□□□ 0.33
CAPN1-203ENST00000525013 NCKAP5O14513 1909 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 ATP6AP2A0A1C7CYW4 349 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 NPIPA2E9PIF3 369 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 NPIPA3F8WFD2 350 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 ADAM10O14672 748 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 ATP6AP2O75787 350 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 ESRRBO95718 433 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 CT62P0C5K7 136 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 MYL2P10916 166 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 CHN1P15882 459 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 KRT15P19012 456 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 FEN1P39748 380 aaKnown RBP17.1■□□□□ 0.33
CAPN1-203ENST00000525013 FOXO1Q12778 655 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 CSTF3Q12996 717 aaKnown RBP17.1■□□□□ 0.33
CAPN1-203ENST00000525013 SLC48A1Q6P1K1 146 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 DND1Q8IYX4 353 aaKnown RBP17.1■□□□□ 0.33
CAPN1-203ENST00000525013 FAM109AQ8N4B1 249 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 PAQR8Q8TEZ7 354 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 PHF10Q8WUB8 498 aaKnown RBP17.1■□□□□ 0.33
CAPN1-203ENST00000525013 KLHL29Q96CT2 875 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 DMRTA2Q96SC8 542 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 FAIM2Q9BWQ8 316 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 BRINP2Q9C0B6 783 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 OR10A5Q9H207 317 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 CNIH4Q9P003 139 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 CES1P1Q9UKY3 287 aa17.1■□□□□ 0.33
CAPN1-203ENST00000525013 APCP25054 2843 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 CAPN14A8MX76 684 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 GLRA3O75311 464 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 LRATO95237 230 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 CLDN14O95500 239 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 ENO1P06733 434 aaKnown RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 SNRPB2P08579 225 aaKnown RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 CSNK2A2P19784 350 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 PKNOX1P55347 436 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 FUT7Q11130 342 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 SLC10A1Q14973 349 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms