RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 TMEM245Q9H330 911 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 RIMS4Q9H426 269 aaPredicted RBP4.34□□□□□ -1.71
SKP1-211ENST00000523359 MINDY3Q9H8M7 445 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 RAB9BQ9NP90 201 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 FARSBQ9NSD9 589 aaKnown RBP4.34□□□□□ -1.71
SKP1-211ENST00000523359 ETNK2Q9NVF9 386 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 C2orf42Q9NWW7 574 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 EPHA6Q9UF33 1036 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 C19orf25Q9UFG5 118 aaPredicted RBP4.34□□□□□ -1.71
SKP1-211ENST00000523359 MTRF1LQ9UGC7 380 aaKnown RBP4.34□□□□□ -1.71
SKP1-211ENST00000523359 CD300AQ9UGN4 299 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 NIP7Q9Y221 180 aaKnown RBP eCLIP4.34□□□□□ -1.71
SKP1-211ENST00000523359 PFASO15067 1338 aa4.34□□□□□ -1.71
SKP1-211ENST00000523359 A0A1B0GUL7 405 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 MSGN1A6NI15 193 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 OR6C65A6NJZ3 312 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 OR52A4PA6NMU1 304 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 SNURFLB1AK76 121 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 K7EQM0 130 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 WRBO00258 174 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 TEX28O15482 410 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 ZNF264O43296 627 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 SNNO75324 88 aaPredicted RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 ASNSP08243 561 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 PRKAR1AP10644 381 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 F3P13726 295 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 CYP2F1P24903 491 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 NUP62P37198 522 aaPredicted RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 RGS19P49795 217 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 DNA2P51530 1060 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 NR0B1P51843 470 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 AIF1P55008 147 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 CLDN8P56748 225 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 SRP54P61011 504 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 RPL23AP62750 156 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 MRPS15P82914 257 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 DRP2Q13474 957 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 COTL1Q14019 142 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 IL18Q14116 193 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 TEAD2Q15562 447 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 MPPE1Q53F39 396 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 CLEC6AQ6EIG7 209 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 FAM166AQ6J272 317 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 BTNL8Q6UX41 500 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 ZNF600Q6ZNG1 722 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 ANKRD33Q7Z3H0 272 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 CDR2LQ86X02 465 aaPredicted RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 ZNF565Q8N9K5 539 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 CCDC63Q8NA47 563 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 DDHD1Q8NEL9 900 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 GPRC5AQ8NFJ5 357 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 OR7A2PQ8NGA2 310 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 SELENOMQ8WWX9 145 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 RIT1Q92963 219 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 P2RX5Q93086 422 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 SGK3Q96BR1 496 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 C10orf90Q96M02 699 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 ZNF607Q96SK3 696 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 FAM49AQ9H0Q0 323 aaPredicted RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 SDCBP2Q9H190 292 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 FN3KRPQ9HA64 309 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 MAGEF1Q9HAY2 307 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 SDHAF3Q9NRP4 125 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 PHPT1Q9NRX4 125 aaPredicted RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 PKD2L2Q9NZM6 624 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 CNOT2Q9NZN8 540 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 KLHL8Q9P2G9 620 aaPredicted RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 CHRNA9Q9UGM1 479 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 MAN1B1Q9UKM7 699 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 ANGPTL2Q9UKU9 493 aa4.33□□□□□ -1.72
SKP1-211ENST00000523359 MRPS28Q9Y2Q9 187 aaKnown RBP4.33□□□□□ -1.72
SKP1-211ENST00000523359 SBNO1A3KN83 1393 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 A0A087WW49 117 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 HEATR9A2RTY3 570 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 IQCF5A8MTL0 148 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 C2CD4DB7Z1M9 353 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 F8VVB4 439 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 F8VWA3 439 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 GOLGA8SH3BPF8 625 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 ZG16O60844 167 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 TRIM3O75382 744 aaPredicted RBP4.32□□□□□ -1.72
SKP1-211ENST00000523359 LGI1O95970 557 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 CSTAP01040 98 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 ATP1B1P05026 303 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 CALCBP10092 127 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PRPS2P11908 318 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 ODC1P11926 461 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 CD1BP29016 333 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PKLRP30613 574 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 CETN2P41208 172 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 HTR2BP41595 481 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
SKP1-211ENST00000523359 SNRPD1P62314 119 aaKnown RBP4.32□□□□□ -1.72
SKP1-211ENST00000523359 CSNK2BP67870 215 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 RPP38P78345 283 aaKnown RBP4.32□□□□□ -1.72
SKP1-211ENST00000523359 MYL7Q01449 175 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 CACNG1Q06432 222 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 OPCMLQ14982 345 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms