RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MMP21Q8N119 569 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 OR10G3Q8NGC4 313 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 OR4K14Q8NGD5 310 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 JSRP1Q96MG2 331 aaPredicted RBP19.07■□□□□ 0.64
SDCBP-209ENST00000522243 TRIM8Q9BZR9 551 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 LDAHQ9H6V9 325 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 EXO5Q9H790 373 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF225Q9UK10 706 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 ADAM29Q9UKF5 820 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 RNF6Q9Y252 685 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 NINQ8N4C6 2090 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 ITPR2Q14571 2701 aa19.07■□□□□ 0.64
SDCBP-209ENST00000522243 PHF3Q92576 2039 aaKnown RBP19.07■□□□□ 0.64
SDCBP-209ENST00000522243 OR6C76A6NM76 312 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 ABHD2P08910 425 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 FBXO45P0C2W1 286 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 RFPL3SP0C7P2 107 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 SERPINB3P29508 390 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 MAN2A2P49641 1150 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 XKP51811 444 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 NUP107P57740 925 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 CLCQ05315 142 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 PMPCAQ10713 525 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 HYAL4Q2M3T9 481 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 TCHHL1Q5QJ38 904 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-209ENST00000522243 COMMD6Q7Z4G1 85 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 CCDC71Q8IV32 467 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-209ENST00000522243 CEP112Q8N8E3 955 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 KIF18AQ8NI77 898 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 RND1Q92730 232 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 PROK2Q9HC23 129 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 SNX6Q9UNH7 406 aa19.06■□□□□ 0.64
SDCBP-209ENST00000522243 CHCHD2Q9Y6H1 151 aaPredicted RBP19.06■□□□□ 0.64
SDCBP-209ENST00000522243 FAM90A27PA6NNH2 459 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 GOLGA8RI6L899 631 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 KIF2AO00139 706 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-209ENST00000522243 RIPK2O43353 540 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 SUPT7LO94864 414 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 FAM153BP0C7A2 387 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 RHOXF2BP0C7M4 288 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 CPMP14384 443 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 HSD17B3P37058 310 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 GALNT1Q10472 559 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-209ENST00000522243 FAM153CQ494X1 144 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 UNC50Q53HI1 259 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 C10orf62Q5T681 223 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-209ENST00000522243 HLA-DQA1Q5Y7H0 255 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 TIFABQ6ZNK6 161 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 IFT20Q8IY31 132 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 TAGAPQ8N103 731 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 FBXW8Q8N3Y1 598 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 MYRIPQ8NFW9 859 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 RHOXF2Q9BQY4 288 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 C1QTNF3Q9BXJ4 246 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 UCK2Q9BZX2 261 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 OR10A5Q9H207 317 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 TRPS1Q9UHF7 1281 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 ACAD8Q9UKU7 415 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 CNOT11Q9UKZ1 510 aaKnown RBP19.05■□□□□ 0.64
SDCBP-209ENST00000522243 BOKQ9UMX3 212 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-209ENST00000522243 PCDHA9Q9Y5H5 950 aa19.05■□□□□ 0.64
SDCBP-209ENST00000522243 TRGV5A0A0B4J1U4 118 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 A0A1B0GVC2 190 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 NKX2-6A6NCS4 301 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 OR14I1A6ND48 311 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 AQP7O14520 342 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 BCKDKO14874 412 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 DLX3O60479 287 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 TAC1P20366 129 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 FUT7Q11130 342 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 NTRK2Q16620 822 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 C6orf163Q5TEZ5 329 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 FAM180BQ6P0A1 224 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 TRMT10CQ7L0Y3 403 aaKnown RBP19.04■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF615Q8N8J6 731 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 CDYL2Q8N8U2 506 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF441Q8N8Z8 693 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 ASB5Q8WWX0 329 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 TM4SF18Q96CE8 201 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 MTBPQ96DY7 904 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 BRINP2Q9C0B6 783 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 ZFP64Q9NPA5 681 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 ALKBH4Q9NXW9 302 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 CNIH4Q9P003 139 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 PKDREJQ9NTG1 2253 aa19.04■□□□□ 0.64
SDCBP-209ENST00000522243 HCFC1P51610 2035 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 C1orf226A1L170 272 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 LRRC3CA6NJW4 275 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 ERAL1O75616 437 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 CHN1P15882 459 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 PORP16435 677 aaPredicted RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 ACVR2AP27037 513 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 DEKP35659 375 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 FEN1P39748 380 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 FBXW4P57775 412 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 TBL3Q12788 808 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF678Q5SXM1 525 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 BICRALQ6AI39 1079 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 SLC48A1Q6P1K1 146 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 FAM111BQ6SJ93 734 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms